RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 TRAV9-2A0A087WT02 112 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 TMEM89A2RUT3 159 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 ZNF207O43670 478 aaKnown RBP8.23□□□□□ -1.09
LINC00649-202ENST00000400353 IGLV1-40P01703 118 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 ORMDL3Q8N138 153 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 PTPN13Q12923 2485 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 OVOL1O14753 267 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
LINC00649-202ENST00000400353 HNRNPA3P51991 378 aaKnown RBP8.23□□□□□ -1.09
LINC00649-202ENST00000400353 TWIST1Q15672 202 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 CD300EQ496F6 205 aaPredicted RBP8.23□□□□□ -1.09
LINC00649-202ENST00000400353 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 MAP1LC3CQ9BXW4 147 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 AP5S1Q9NUS5 200 aa8.23□□□□□ -1.09
LINC00649-202ENST00000400353 SYS1-DBNDD2H3BUS1 97 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 CFHR3Q02985 330 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 HSD52Q0P140 79 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 IL17RELQ6ZVW7 336 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 OR10AG1Q8NH19 301 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 NPFFR1Q9GZQ6 430 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 MRPL16Q9NX20 251 aaKnown RBP8.22□□□□□ -1.09
LINC00649-202ENST00000400353 ERG28Q9UKR5 140 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 HECTD1Q9ULT8 2610 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 IGHV3OR16-13A0A075B7E8 117 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 IGHV3-74A0A0B4J1X5 117 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 D6R8Y8 96 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 IGLC3P0DOY3 106 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 MRPL51Q4U2R6 128 aaKnown RBP8.22□□□□□ -1.09
LINC00649-202ENST00000400353 PRR31Q5SQ13 230 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 OR4X2Q8NGF9 303 aa8.22□□□□□ -1.09
LINC00649-202ENST00000400353 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
LINC00649-202ENST00000400353 ABCA1O95477 2261 aa8.21□□□□□ -1.09
LINC00649-202ENST00000400353 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
LINC00649-202ENST00000400353 K7EMT4 169 aa8.21□□□□□ -1.1
LINC00649-202ENST00000400353 CSN3P07498 182 aa8.21□□□□□ -1.1
LINC00649-202ENST00000400353 BLCAPP62952 87 aa8.21□□□□□ -1.1
LINC00649-202ENST00000400353 LOXL1Q08397 574 aaPredicted RBP8.21□□□□□ -1.1
LINC00649-202ENST00000400353 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
LINC00649-202ENST00000400353 A0A096LNT2 108 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 TAX1BP3O14907 124 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 AVPP01185 164 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 HIST2H2BCQ6DN03 193 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 OR10J6PQ8NGY7 276 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 NRGNQ92686 78 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 PSMG3-AS1Q96PY0 264 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 IGHV7-4-1A0A0J9YVY3 117 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 GAGE12HA6NDE8 117 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 CKS2P33552 79 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 CACNG7P62955 275 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 AMMECR1LQ6DCA0 310 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 UNQ9165/PRO28630Q6UXU0 137 aa8.2□□□□□ -1.1
LINC00649-202ENST00000400353 BEX4Q9NWD9 120 aaPredicted RBP8.2□□□□□ -1.1
LINC00649-202ENST00000400353 APCP25054 2843 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 OR4C46A6NHA9 309 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 SOCS3O14543 225 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 TRBV12-3P01733 135 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 IGHV3-11P01762 117 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 FAM106AQ4KMX7 169 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 UFSP1Q6NVU6 142 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 Q6ZN92 141 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 SPATA12Q7Z6I5 190 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 ZNF418Q8TF45 676 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-202ENST00000400353 KLK15Q9H2R5 256 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 ST20Q9HBF5 79 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 SIGLEC8Q9NYZ4 499 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 WNK2Q9Y3S1 2297 aa8.19□□□□□ -1.1
LINC00649-202ENST00000400353 DEFB112Q30KQ8 113 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 LRRC75A-AS1Q8N1F1 130 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 DAZ1Q9NQZ3 744 aaKnown RBP8.18□□□□□ -1.1
LINC00649-202ENST00000400353 IGHV4-4A0A075B6R2 117 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 IGKV3D-20A0A0C4DH25 116 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 HINT1P49773 126 aaPredicted RBP8.18□□□□□ -1.1
LINC00649-202ENST00000400353 GPHB5Q86YW7 130 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 ATOH7Q8N100 152 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 C20orf173Q96LM9 149 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 MAP1LC3AQ9H492 121 aa8.18□□□□□ -1.1
LINC00649-202ENST00000400353 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 TSPOP30536 169 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 IFI27P40305 119 aaPredicted RBP8.17□□□□□ -1.1
LINC00649-202ENST00000400353 FOXE3Q13461 319 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 LINC01545Q5VT33 79 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 RNF185Q96GF1 192 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 ZNF747Q9BV97 191 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 MS4A6AQ9H2W1 248 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 A0A087WX48 190 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 TRAV21A0A0B4J279 112 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 LINC01546A6NGU7 62 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 FSHBP01225 129 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 HBDP02042 147 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 PSMB8P28062 276 aa8.17□□□□□ -1.1
LINC00649-202ENST00000400353 Q6ZS46 218 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms