RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 I3L2K1 104 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 COL4A3Q01955 1670 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 ZNF106Q9H2Y7 1883 aaKnown RBP6.17□□□□□ -1.42
USP47-203ENST00000399455 SDK2Q58EX2 2172 aa6.17□□□□□ -1.42
USP47-203ENST00000399455 TRAV13-2A0A0B4J235 113 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 ESDP10768 282 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 K7EMI3 77 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 NDUFA7O95182 113 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 FAM104BQ5XKR9 115 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 C11orf71Q6IPW1 123 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 LINC00518Q8N0U6 118 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 SPANXA1Q9NS26 97 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 ODF3BA8MYP8 253 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 C2orf66Q6UXQ4 117 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 CRYGCP07315 174 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 GUSBP1Q15486 140 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 C14orf144Q96I85 54 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 MAP6D1Q9H9H5 199 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 NDUFA1O15239 70 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 MIFP14174 115 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 DEFB131BA0A096LNP1 70 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 NUPR2A6NF83 97 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 F6UB75 175 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 ODF3L1Q8IXM7 274 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 DYNAPQ8N1N2 210 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 FXYD5Q96DB9 178 aa6.16□□□□□ -1.42
USP47-203ENST00000399455 NXPH4O95158 308 aa6.15□□□□□ -1.42
USP47-203ENST00000399455 AMTNQ6UX39 209 aa6.15□□□□□ -1.42
USP47-203ENST00000399455 C7orf33Q8WU49 177 aa6.15□□□□□ -1.42
USP47-203ENST00000399455 COL5A1P20908 1838 aaPredicted RBP6.15□□□□□ -1.42
USP47-203ENST00000399455 LINC01548A6NM66 108 aa6.15□□□□□ -1.42
USP47-203ENST00000399455 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
USP47-203ENST00000399455 HERV-K104P63124 156 aa6.15□□□□□ -1.42
USP47-203ENST00000399455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.15□□□□□ -1.42
USP47-203ENST00000399455 B9D2Q9BPU9 175 aa6.15□□□□□ -1.42
USP47-203ENST00000399455 TMEM213A2RRL7 107 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 GNRH2O43555 120 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 STPG4Q8N801 248 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 KIR2DL5BQ8NHK3 375 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 ZNF524Q96C55 264 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 SPCS1Q9Y6A9 102 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 DIDO1Q9BTC0 2240 aaKnown RBP6.15□□□□□ -1.43
USP47-203ENST00000399455 COL6A6A6NMZ7 2263 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 Q6ZSV7 163 aa6.15□□□□□ -1.43
USP47-203ENST00000399455 TRAV8-2A0A0B4J237 113 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 LY6G6CO95867 125 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 P0DMU3 169 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 FAM231AP0DMU4 169 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 FAM231CP0DMU5 169 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 MTURNQ8N3F0 131 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 DEFB4AO15263 64 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 H3BQ85 93 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 GAGE2BQ13066 116 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 RITA1Q96K30 269 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 K7EIM0 57 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 CXCL5P42830 114 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 ACACAQ13085 2346 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 TRAV26-2A0A0B4J265 109 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 WI2-2373I1.2A0A1W2PRP0 233 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 LYPD6Q86Y78 171 aa6.14□□□□□ -1.43
USP47-203ENST00000399455 BRWD1Q9NSI6 2320 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 RTTNQ86VV8 2226 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 ALPK3Q96L96 1907 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 CTSGP08311 255 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 MRPL51Q4U2R6 128 aaKnown RBP6.13□□□□□ -1.43
USP47-203ENST00000399455 ZNF479Q96JC4 524 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 CYTL1Q9NRR1 136 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 TRBV7-3A0A075B6L6 115 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 TRAV8-3A0A0A6YYJ7 113 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 LTAP01374 205 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 IGLV1-47P01700 117 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 CRYGDP07320 174 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 MAP1BP46821 2468 aaKnown RBP6.13□□□□□ -1.43
USP47-203ENST00000399455 SPINK8P0C7L1 97 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 GAGE2EQ4V326 116 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 FAM231DQ6ZW35 169 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 GAGE2DQ9UEU5 116 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 A0A1B0GV72 72 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 IGF1P05019 195 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 CTAG1AP78358 180 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 AGPAT4-IT1Q9H0P7 198 aa6.13□□□□□ -1.43
USP47-203ENST00000399455 A0A087X0K7 114 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 PSMG3-AS1Q96PY0 264 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 ESM1Q9NQ30 184 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.12□□□□□ -1.43
USP47-203ENST00000399455 IGKV2-29A2NJV5 120 aaPredicted RBP6.12□□□□□ -1.43
USP47-203ENST00000399455 NDUFS5O43920 106 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 MED14OSP0DP75 135 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 ZNF625Q96I27 306 aaPredicted RBP6.12□□□□□ -1.43
USP47-203ENST00000399455 LINC00479Q96M42 142 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 C1orf147Q96MC9 270 aaPredicted RBP6.12□□□□□ -1.43
USP47-203ENST00000399455 SPTA1P02549 2419 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 ZGRF1Q86YA3 2104 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 C9orf47Q6ZRZ4 202 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 Q6ZSR3 168 aa6.12□□□□□ -1.43
USP47-203ENST00000399455 SNRNP200O75643 2136 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms