RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 COMMD5Q9GZQ3 224 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 IGLV3-9A0A075B6K5 115 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 TRAV4A0A0B4J268 109 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 KLLNB2CW77 178 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 H0YJW9 148 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 HRASP01112 189 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 FAM222AQ5U5X8 452 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 FAM168AQ92567 244 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 SLC35E1Q96K37 410 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 ZNF714Q96N38 554 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 RPUSD1Q9UJJ7 312 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 CYSLTR1Q9Y271 337 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 TRAPPC1Q9Y5R8 145 aa4.72□□□□□ -1.65
TRAPPC13-202ENST00000399438 WNK1Q9H4A3 2382 aa4.71□□□□□ -1.65
TRAPPC13-202ENST00000399438 MDFIC2A0A1B0GVS7 189 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 GGTLC3B5MD39 225 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 CGB3P0DN86 165 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 CGB7P0DN87 165 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 HSD52Q0P140 79 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 ODF3L2Q3SX64 289 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 TDRG1Q3Y452 100 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 DPPA3Q6W0C5 159 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 LCNL1Q6ZST4 164 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 NUP35Q8NFH5 326 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 TMEM106BQ9NUM4 274 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 COX11Q9Y6N1 276 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 A0A087WWC5 75 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 E9PLD3 99 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 J3QQQ9 107 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 LINC00869P0C866 280 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 RPL29P47914 159 aaKnown RBP4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 CLEC19AQ6UXS0 136 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZC2HC1AQ96GY0 325 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 NPVFQ9HCQ7 196 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 XCL2Q9UBD3 114 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGSF10Q6WRI0 2623 aa4.71□□□□□ -1.66
TRAPPC13-202ENST00000399438 TRAV8-1A0A0A6YYK1 113 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 MUC21A0A0G2JKD1 596 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 MUC21A0A140T8X8 626 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 UBE2L3P68036 154 aaKnown RBP4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 RTL8BQ17RB0 113 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 MUC21Q5SSG8 566 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 UFSP1Q6NVU6 142 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 C5orf17Q8NAS9 161 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 SFXN3Q9BWM7 321 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 TMEM14BQ9NUH8 114 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 UPK2O00526 184 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 NPFFO15130 113 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 NDUFB3O43676 98 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 PLGLAQ15195 96 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 IQCJQ1A5X6 159 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 Q6ZSN1 163 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 ATOH7Q8N100 152 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 FER1L6-AS1Q8NA97 138 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 RNASE6Q93091 150 aaKnown RBP4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 C11orf52Q96A22 123 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 C19orf24Q9BVV8 132 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 SAMD10Q9BYL1 202 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 TP73-AS1Q9UF72 201 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 NAV2Q8IVL1 2488 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV3OR16-10A0A075B7F0 116 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF705FA8MVS1 300 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF705DP0CH99 300 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF705BP0CI00 300 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 RNASE2P10153 161 aaKnown RBP4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF493Q6ZR52 646 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 FAM19A3Q7Z5A8 133 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF664Q8N3J9 261 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 MANBALQ9NQG1 85 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF355PQ9NSJ1 428 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 TIMM9Q9Y5J7 89 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 MTORP42345 2549 aa4.7□□□□□ -1.66
TRAPPC13-202ENST00000399438 TMEM250H0YL14 139 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 ISLRO14498 428 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 GPX1P07203 203 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 GZMBP10144 247 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 ATP5L2Q7Z4Y8 100 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 FAM19A2Q8N3H0 131 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 SMDT1Q9H4I9 107 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 CBLN4Q9NTU7 201 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF835Q9Y2P0 537 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 ABCA2Q9BZC7 2435 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 TRBV24-1A0A075B6N3 115 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV3OR16-13A0A075B7E8 117 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV3-74A0A0B4J1X5 117 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF137PP52743 207 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 HES1Q14469 280 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGFL4Q6B9Z1 124 aa4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 AMMECR1Q9Y4X0 333 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC13-202ENST00000399438 COX7A2P2O60397 106 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 PRCDQ00LT1 54 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 NOTCH2NLQ7Z3S9 236 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV1-69-2A0A0G2JMI3 117 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 B4DEV8 164 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 SERF1AO75920 110 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 TRBV12-3P01733 135 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 RBP4P02753 201 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 LYZP61626 148 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms