RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 A8MTW9 85 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 KLLNB2CW77 178 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 M0R2Z0 102 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 NUTF2P61970 127 aaKnown RBP9.72□□□□□ -0.85
SEC13-209ENST00000397117 ELOBQ15370 118 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 PRR9Q5T870 116 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 AMTNQ6UX39 209 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 CLUHP3Q96NS8 147 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 WFDC10AQ9H1F0 79 aa9.72□□□□□ -0.85
SEC13-209ENST00000397117 ORM1P02763 201 aa9.71□□□□□ -0.85
SEC13-209ENST00000397117 S100PP25815 95 aa9.71□□□□□ -0.85
SEC13-209ENST00000397117 TRPT1Q86TN4 253 aaKnown RBP9.71□□□□□ -0.85
SEC13-209ENST00000397117 DEFB125Q8N687 156 aa9.71□□□□□ -0.85
SEC13-209ENST00000397117 OR2D3Q8NGH3 330 aa9.71□□□□□ -0.85
SEC13-209ENST00000397117 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 TRAV12-2A0A075B6T6 113 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 XKRY2A2RUG3 117 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 C7orf71A4D174 169 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 TMEM189A5PLL7 270 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 C5orf52A6NGY3 159 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 FXYD7P58549 80 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 CT83Q5H943 113 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 IMMP2LQ96T52 175 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 URGCP-MRPS24S4R325 110 aa9.71□□□□□ -0.86
SEC13-209ENST00000397117 AGRNO00468 2067 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 RBMY1BA6NDE4 496 aaKnown RBP9.7□□□□□ -0.86
SEC13-209ENST00000397117 RBMY1EA6NEQ0 496 aaKnown RBP9.7□□□□□ -0.86
SEC13-209ENST00000397117 A8MWL6 223 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 CA1P00915 261 aaPredicted RBP9.7□□□□□ -0.86
SEC13-209ENST00000397117 RBMY1DP0C7P1 496 aaKnown RBP9.7□□□□□ -0.86
SEC13-209ENST00000397117 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 GFI1BQ5VTD9 330 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 Q6AWC8 147 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 NAGKQ9UJ70 344 aa9.7□□□□□ -0.86
SEC13-209ENST00000397117 TMSB15BA0A087X1C1 80 aa9.69□□□□□ -0.86
SEC13-209ENST00000397117 UBE2CO00762 179 aa9.69□□□□□ -0.86
SEC13-209ENST00000397117 AMBPP02760 352 aa9.69□□□□□ -0.86
SEC13-209ENST00000397117 RPL35AP18077 110 aaKnown RBP9.69□□□□□ -0.86
SEC13-209ENST00000397117 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
SEC13-209ENST00000397117 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
SEC13-209ENST00000397117 ZFP82Q8N141 532 aa9.69□□□□□ -0.86
SEC13-209ENST00000397117 Q8N1Y9 231 aa9.69□□□□□ -0.86
SEC13-209ENST00000397117 TSKUQ8WUA8 353 aa9.69□□□□□ -0.86
SEC13-209ENST00000397117 PYGO2Q9BRQ0 406 aa9.69□□□□□ -0.86
SEC13-209ENST00000397117 TRBV24-1A0A075B6N3 115 aa9.68□□□□□ -0.86
SEC13-209ENST00000397117 CXCL1P09341 107 aa9.68□□□□□ -0.86
SEC13-209ENST00000397117 TCL1AP56279 114 aa9.68□□□□□ -0.86
SEC13-209ENST00000397117 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
SEC13-209ENST00000397117 SRD5A3Q9H8P0 318 aa9.68□□□□□ -0.86
SEC13-209ENST00000397117 TGIF2-C20orf24A0A0A6YYL0 155 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 A8MZ25 164 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 INSP01308 110 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 MORN3Q6PF18 240 aaPredicted RBP9.67□□□□□ -0.86
SEC13-209ENST00000397117 Q6ZQT7 251 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 SMIM27A0A1W2PRY6 76 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 GZMBP10144 247 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 FAM3BP58499 235 aaPredicted RBP9.67□□□□□ -0.86
SEC13-209ENST00000397117 FAM159AQ6UWV7 190 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 NEU1Q99519 415 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 GFRA4Q9GZZ7 299 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 C11orf21Q9P2W6 132 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 NAT8BQ9UHF3 227 aa9.67□□□□□ -0.86
SEC13-209ENST00000397117 IGKV3D-20A0A0C4DH25 116 aa9.66□□□□□ -0.86
SEC13-209ENST00000397117 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
SEC13-209ENST00000397117 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
SEC13-209ENST00000397117 CRXO43186 299 aaPredicted RBP9.66□□□□□ -0.86
SEC13-209ENST00000397117 ZNF324O75467 553 aaPredicted RBP9.66□□□□□ -0.86
SEC13-209ENST00000397117 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
SEC13-209ENST00000397117 MUC21Q5SSG8 566 aa9.66□□□□□ -0.86
SEC13-209ENST00000397117 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
SEC13-209ENST00000397117 TPPP3Q9BW30 176 aa9.66□□□□□ -0.86
SEC13-209ENST00000397117 C1QTNF4Q9BXJ3 329 aa9.66□□□□□ -0.86
SEC13-209ENST00000397117 GRIFINA4D1Z8 144 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 AKR1D1P51857 326 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 BTF3L4Q96K17 158 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 FAM210BQ96KR6 192 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
SEC13-209ENST00000397117 PLECQ15149 4684 aaKnown RBP9.64□□□□□ -0.87
SEC13-209ENST00000397117 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
SEC13-209ENST00000397117 S100A8P05109 93 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 S100A6P06703 90 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 GTSF1Q8WW33 167 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 TMEM208Q9BTX3 173 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 CSTL1Q9H114 145 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 IGHV1OR15-1A0A075B7D0 117 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 S100A4P26447 101 aaKnown RBP9.64□□□□□ -0.87
SEC13-209ENST00000397117 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 LINC01587Q99440 93 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 SPATA25Q9BR10 227 aa9.64□□□□□ -0.87
SEC13-209ENST00000397117 ALMS1Q8TCU4 4167 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms