RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 KLHL30-AS1Q8NEE0 82 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 FANCD2OSQ96PS1 177 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 SCGB3A1Q96QR1 104 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 ZMAT4Q9H898 229 aa7.61□□□□□ -1.19
TRIM39-203ENST00000396547 DCHS2Q6V1P9 2916 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 LINC01548A6NM66 108 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 E7EQL1 145 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 PDE6HQ13956 83 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 C11orf21Q9P2W6 132 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 IGKV3D-20A0A0C4DH25 116 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 ARL3P36405 182 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 ZNF575Q86XF7 245 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 RAB1BQ9H0U4 201 aa7.6□□□□□ -1.19
TRIM39-203ENST00000396547 IGHG4P01861 327 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 MT-ATP8P03928 68 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 MGPP08493 103 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 NDPQ00604 133 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 ECSCRQ19T08 205 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 C8orf31Q8N9H6 132 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 ZFYVE26Q68DK2 2539 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 IGKV3-7A0A075B6H7 116 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 A0A087WX48 190 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 TNFRSF13BO14836 293 aaPredicted RBP7.59□□□□□ -1.19
TRIM39-203ENST00000396547 C3orf36Q3SXR2 165 aa7.59□□□□□ -1.19
TRIM39-203ENST00000396547 SRSF8Q9BRL6 282 aaKnown RBP7.59□□□□□ -1.19
TRIM39-203ENST00000396547 ZNF815PA8K554 130 aa7.59□□□□□ -1.2
TRIM39-203ENST00000396547 H7C2G1 150 aa7.59□□□□□ -1.2
TRIM39-203ENST00000396547 MYMXA0A1B0GTQ4 84 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 SCGB1C2P0DMR2 95 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 DEFB1P60022 68 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 SRSF1Q07955 248 aaKnown RBP eCLIP7.58□□□□□ -1.2
TRIM39-203ENST00000396547 AGPAT4-IT1Q9H0P7 198 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 CHD6Q8TD26 2715 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 CLEC3BP05452 202 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 SLC25A16P16260 332 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 ANXA2RQ3ZCQ2 193 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 TMEM78Q5T7P6 136 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 SPATA25Q9BR10 227 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 DPM3Q9P2X0 92 aa7.58□□□□□ -1.2
TRIM39-203ENST00000396547 F8W735 103 aaPredicted RBP7.57□□□□□ -1.2
TRIM39-203ENST00000396547 BRI3O95415 125 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 PRB1P04280 392 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 CTSGP08311 255 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 SCGB1A1P11684 91 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 FOXI1Q12951 378 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 C5orf64Q2M2E5 130 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 LINC01560Q8TB33 94 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 PLEKHB2Q96CS7 222 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 RPL39LQ96EH5 51 aaKnown RBP7.57□□□□□ -1.2
TRIM39-203ENST00000396547 PRADC1Q9BSG0 188 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 UBR5O95071 2799 aaPredicted RBP7.57□□□□□ -1.2
TRIM39-203ENST00000396547 H7C1H1 209 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 IGF1P05019 195 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
TRIM39-203ENST00000396547 NFE4Q86UQ8 179 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 SPTAN1Q13813 2472 aaKnown RBP7.57□□□□□ -1.2
TRIM39-203ENST00000396547 PF4V1P10720 104 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 MORN3Q6PF18 240 aaPredicted RBP7.57□□□□□ -1.2
TRIM39-203ENST00000396547 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 C14orf178Q8N769 122 aaPredicted RBP7.57□□□□□ -1.2
TRIM39-203ENST00000396547 FAM57AQ8TBR7 257 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 MRAP2Q96G30 205 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 KAAG1Q9UBP8 84 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 PRO0461Q9UI25 63 aa7.57□□□□□ -1.2
TRIM39-203ENST00000396547 IGLV11-55A0A075B6I3 123 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 LGALS1P09382 135 aaKnown RBP7.56□□□□□ -1.2
TRIM39-203ENST00000396547 HERV-K104P63124 156 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 CLEC19AQ6UXS0 136 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 ANKHD1Q8IWZ3 2542 aaKnown RBP7.56□□□□□ -1.2
TRIM39-203ENST00000396547 IGLV2-18A0A075B6J9 118 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 SHISA9B4DS77 424 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 F8VRH5 84 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 GATA3P23771 443 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 PLNP26678 52 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 NRACQ8N912 160 aa7.56□□□□□ -1.2
TRIM39-203ENST00000396547 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
TRIM39-203ENST00000396547 C15orf32Q32M92 178 aa7.55□□□□□ -1.2
TRIM39-203ENST00000396547 PIFOQ8TCI5 191 aa7.55□□□□□ -1.2
TRIM39-203ENST00000396547 DLX4Q92988 240 aaPredicted RBP7.55□□□□□ -1.2
TRIM39-203ENST00000396547 KIR2DL4Q99706 377 aa7.55□□□□□ -1.2
TRIM39-203ENST00000396547 RPL11P62913 178 aaKnown RBP7.55□□□□□ -1.2
TRIM39-203ENST00000396547 XGP55808 180 aa7.55□□□□□ -1.2
TRIM39-203ENST00000396547 RNF183Q96D59 192 aa7.55□□□□□ -1.2
TRIM39-203ENST00000396547 LINC00527Q9UJ94 153 aa7.55□□□□□ -1.2
TRIM39-203ENST00000396547 PRSS29PA6NIE9 313 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 B9A039 149 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 PRTN3P24158 256 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 C1QTNF4Q9BXJ3 329 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 CFAP46Q8IYW2 2715 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.54□□□□□ -1.2
TRIM39-203ENST00000396547 FHL3Q13643 280 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 TAL2Q16559 108 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 PSMG4Q5JS54 123 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 SMIM2Q9BVW6 85 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
TRIM39-203ENST00000396547 MAP1AP78559 2803 aaPredicted RBP7.54□□□□□ -1.2
TRIM39-203ENST00000396547 PRR30Q53SZ7 412 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms