RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 COX6B1P14854 86 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 TAS2R19P59542 299 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 GGNQ86UU5 652 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 ABRACLQ9P1F3 81 aa3.13□□□□□ -1.91
HERC4-204ENST00000395198 FAM24AA6NFZ4 105 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 TIMM17BO60830 172 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 ZNF324O75467 553 aaPredicted RBP3.12□□□□□ -1.91
HERC4-204ENST00000395198 C3orf79P0CE67 100 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 FXYD6P3P58550 94 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 OPRPNQ99935 248 aaPredicted RBP3.12□□□□□ -1.91
HERC4-204ENST00000395198 DSCAML1Q8TD84 2053 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 A0A1W2PQD3 144 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 LINC01548A6NM66 108 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 SNRPGP15A8MWD9 76 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 CCL3P10147 92 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 C1orf100Q5SVJ3 147 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 C7orf69Q9H7B7 122 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 GBF1Q92538 1859 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 A6NN06 94 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 COX7A2P2O60397 106 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 DIRC1Q969H9 104 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 SMDT1Q9H4I9 107 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 RABAC1Q9UI14 185 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 KLK13Q9UKR3 277 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 ZNF462Q96JM2 2506 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 OBSL1O75147 1896 aa3.12□□□□□ -1.91
HERC4-204ENST00000395198 K7EQG2 157 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 MPV17P39210 176 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 LINC01545Q5VT33 79 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 TREML4Q6UXN2 200 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 Q8N8P6 123 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 CYB561D1Q8N8Q1 229 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 FDCSPQ8NFU4 85 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 BBC3Q96PG8 261 aaPredicted RBP3.11□□□□□ -1.91
HERC4-204ENST00000395198 ZGRF1Q86YA3 2104 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 ZNF407Q9C0G0 2248 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 SERF1AO75920 110 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 TSHBP01222 138 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 IGLV3-19P01714 112 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 LINC00271P0C7V0 271 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 PSMB2P49721 201 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 RPL18Q07020 188 aaKnown RBP3.11□□□□□ -1.91
HERC4-204ENST00000395198 LYPD4Q6UWN0 246 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 LYPD5Q6UWN5 251 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 TMEM61Q8N0U2 210 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 PFN4Q8NHR9 129 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 TVP23CQ96ET8 276 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 URB1-AS1Q96HZ7 61 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 ABHD14BQ96IU4 210 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 ZNF286AQ9HBT8 521 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 SSSCA1O60232 199 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 PIPP12273 146 aaPredicted RBP3.11□□□□□ -1.91
HERC4-204ENST00000395198 ZNF117Q03924 483 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 SPTBN4Q9H254 2564 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 IGHV4-28A0A0C4DH34 117 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 M0R135 149 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 HBDP02042 147 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 PEBP1P30086 187 aaKnown RBP3.11□□□□□ -1.91
HERC4-204ENST00000395198 RPS27P42677 84 aaKnown RBP3.11□□□□□ -1.91
HERC4-204ENST00000395198 DYNLT3P51808 116 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 C11orf71Q6IPW1 123 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 C7orf65Q6ZTY9 151 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 AQP3Q92482 292 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 ZNF580Q9UK33 172 aa3.11□□□□□ -1.91
HERC4-204ENST00000395198 TMEM272A0A1B0GTI8 110 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 IGHV1-2P23083 117 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 FXYD4P59646 89 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 ZNF876PQ49A33 203 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 ADAMTSL4-AS1Q5T5F5 129 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 TOMM5Q8N4H5 51 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 ZNF355PQ9NSJ1 428 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 IGHV3OR16-12A0A075B7B8 117 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 C16orf97H3BN30 126 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 HILPDAQ9Y5L2 63 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 A6NIN4 97 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 LTAP01374 205 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 FHL2Q14192 279 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 TMEM155Q4W5P6 130 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 TTTY12Q9BZ98 90 aa3.1□□□□□ -1.91
HERC4-204ENST00000395198 FAM181BA6NEQ2 426 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 HSPB1P04792 205 aaKnown RBP3.09□□□□□ -1.91
HERC4-204ENST00000395198 PATE2Q6UY27 113 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 SLC25A15Q9Y619 301 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 LTBP2Q14767 1821 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 IGLV3-9A0A075B6K5 115 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 CIRBPQ14011 172 aaKnown RBP3.09□□□□□ -1.91
HERC4-204ENST00000395198 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 SIGLECL1Q8N7X8 197 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 CLEC7AQ9BXN2 247 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 CCL28Q9NRJ3 127 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 PLXNA3P51805 1871 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 ABCA2Q9BZC7 2435 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 IGHV3-38A0A0C4DH36 116 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 C9JCJ5 164 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 FCGR2CP31995 323 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 CRYBA2P53672 197 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 UBE2BP63146 152 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 BSPH1Q075Z2 132 aa3.09□□□□□ -1.91
HERC4-204ENST00000395198 IL36BQ9NZH7 164 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms