RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TRBV19A0A075B6N1 114 aa9.66□□□□□ -0.86
SLC28A1-203ENST00000394573 ZNF784Q8NCA9 323 aaPredicted RBP9.66□□□□□ -0.86
SLC28A1-203ENST00000394573 KLF14Q8TD94 323 aaPredicted RBP9.66□□□□□ -0.86
SLC28A1-203ENST00000394573 CADP27708 2225 aa9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 TRAV17A0A0B4J275 112 aa9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 TRIAP1O43715 76 aa9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 COX7CP15954 63 aa9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 CLEC2BQ92478 149 aa9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 TNRC18O15417 2968 aaPredicted RBP9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 RPS28P62857 69 aaKnown RBP9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 C10orf105Q8TEF2 133 aa9.65□□□□□ -0.86
SLC28A1-203ENST00000394573 TACC2O95359 2948 aa9.65□□□□□ -0.87
SLC28A1-203ENST00000394573 PINLYPA6NC86 204 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 C17orf58Q2M2W7 97 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 PRR7Q8TB68 274 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 METTL26Q96S19 204 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 JPT2Q9H910 190 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 TRACP01848 142 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 SUB1P53999 127 aaKnown RBP eCLIP9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 ZNF575Q86XF7 245 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 NEXN-AS1Q8NBZ9 246 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 MRAPQ8TCY5 172 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 TMEM263Q8WUH6 116 aaKnown RBP9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 DMXL2Q8TDJ6 3036 aa9.64□□□□□ -0.87
SLC28A1-203ENST00000394573 F8WDY8 70 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 Q6ZSV7 163 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 RPS19BP1Q86WX3 136 aaKnown RBP9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 LOC400499M0QZD8 3231 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 IGHV3-64A0A075B6Q5 118 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 ZNRF2Q8NHG8 242 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 DEFB118Q96PH6 123 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 CEP250Q9BV73 2442 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 C2orf48Q96LS8 159 aa9.63□□□□□ -0.87
SLC28A1-203ENST00000394573 TRAV12-1A0A0B4J245 112 aa9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 TIMM8AO60220 97 aaPredicted RBP9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 NRACQ8N912 160 aa9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 S4R3C0 116 aa9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 SLC25A29Q8N8R3 303 aa9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
SLC28A1-203ENST00000394573 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 CD40P25942 277 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 DEFB108BQ8NET1 73 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 TRAV8-3A0A0A6YYJ7 113 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 TRBV6-1A0A0K0K1D8 114 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 A0A1W2PPC4 97 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 CCL11P51671 97 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 ERCC8Q13216 396 aa9.61□□□□□ -0.87
SLC28A1-203ENST00000394573 IGHV3-72A0A0B4J1Y9 119 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 IQCF6A8MYZ5 107 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 P0DMU3 169 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 FAM231AP0DMU4 169 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 FAM231CP0DMU5 169 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 CRYGAP11844 174 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 CXXC4Q9H2H0 198 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 A0A0G2JNJ9 132 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 SEC61GP60059 68 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 Q9UFV3 132 aa9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 RP1L1Q8IWN7 2480 aaPredicted RBP9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 TPRP12270 2363 aaKnown RBP9.6□□□□□ -0.87
SLC28A1-203ENST00000394573 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
SLC28A1-203ENST00000394573 RHOHQ15669 191 aa9.59□□□□□ -0.87
SLC28A1-203ENST00000394573 DSCAMO60469 2012 aa9.59□□□□□ -0.87
SLC28A1-203ENST00000394573 NPC2P61916 151 aa9.59□□□□□ -0.87
SLC28A1-203ENST00000394573 GUSBP11Q6P575 273 aa9.59□□□□□ -0.87
SLC28A1-203ENST00000394573 KLRB1Q12918 225 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 SCNM1Q9BWG6 230 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 IGHV1-45A0A0A0MS14 117 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 TRAV12-3A0A0B4J271 114 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 UBE2E1P51965 193 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 TMEM14CQ9P0S9 112 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 NACAE9PAV3 2078 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 WNK2Q9Y3S1 2297 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 FAM240AA0A1B0GVK7 77 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 LMO7DNF2Z398 122 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 LYZL6O75951 148 aa9.58□□□□□ -0.88
SLC28A1-203ENST00000394573 IGKV3D-15A0A087WSY6 115 aa9.57□□□□□ -0.88
SLC28A1-203ENST00000394573 C17orf100A8MU93 164 aa9.57□□□□□ -0.88
SLC28A1-203ENST00000394573 COX6A1P12074 109 aa9.57□□□□□ -0.88
SLC28A1-203ENST00000394573 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
SLC28A1-203ENST00000394573 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
SLC28A1-203ENST00000394573 ADARB2-AS1A8MUL3 147 aa9.57□□□□□ -0.88
SLC28A1-203ENST00000394573 Q6ZS52 159 aa9.57□□□□□ -0.88
SLC28A1-203ENST00000394573 ROS1P08922 2347 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 MED13Q9UHV7 2174 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 IGHG3P01860 377 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 CRYGDP07320 174 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 FAM27E3Q08E93 113 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 SPINK14Q6IE38 97 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 PRSS2P07478 247 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 HES7Q9BYE0 225 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 IMUPQ9GZP8 106 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 SIT1Q9Y3P8 196 aa9.56□□□□□ -0.88
SLC28A1-203ENST00000394573 MAP1BP46821 2468 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms