RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 KAAG1Q9UBP8 84 aa12.93□□□□□ -0.34
SIPA1-201ENST00000394224 NAV2Q8IVL1 2488 aa12.92□□□□□ -0.34
SIPA1-201ENST00000394224 IGLV11-55A0A075B6I3 123 aa12.92□□□□□ -0.34
SIPA1-201ENST00000394224 Q6AWC8 147 aa12.92□□□□□ -0.34
SIPA1-201ENST00000394224 IGFL3Q6UXB1 125 aa12.92□□□□□ -0.34
SIPA1-201ENST00000394224 PTH2Q96A98 100 aa12.92□□□□□ -0.34
SIPA1-201ENST00000394224 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
SIPA1-201ENST00000394224 RAB1BQ9H0U4 201 aa12.92□□□□□ -0.34
SIPA1-201ENST00000394224 A0A1B0GWB2 263 aa12.91□□□□□ -0.34
SIPA1-201ENST00000394224 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
SIPA1-201ENST00000394224 OR4X2Q8NGF9 303 aa12.91□□□□□ -0.34
SIPA1-201ENST00000394224 G3V4G9 280 aa12.91□□□□□ -0.34
SIPA1-201ENST00000394224 OR9G4Q8NGQ1 327 aa12.91□□□□□ -0.34
SIPA1-201ENST00000394224 SCGB3A1Q96QR1 104 aa12.91□□□□□ -0.34
SIPA1-201ENST00000394224 JPT2Q9H910 190 aa12.91□□□□□ -0.34
SIPA1-201ENST00000394224 HHLA3Q9XRX5 114 aa12.91□□□□□ -0.34
SIPA1-201ENST00000394224 TRBV12-3P01733 135 aa12.9□□□□□ -0.34
SIPA1-201ENST00000394224 IGHV7-81A0A0B4J1V7 117 aa12.9□□□□□ -0.34
SIPA1-201ENST00000394224 UFSP1Q6NVU6 142 aa12.9□□□□□ -0.34
SIPA1-201ENST00000394224 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
SIPA1-201ENST00000394224 A0A087WWL8 130 aa12.9□□□□□ -0.34
SIPA1-201ENST00000394224 GNRH2O43555 120 aa12.9□□□□□ -0.34
SIPA1-201ENST00000394224 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
SIPA1-201ENST00000394224 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
SIPA1-201ENST00000394224 PRR9Q5T870 116 aa12.89□□□□□ -0.35
SIPA1-201ENST00000394224 MRPL16Q9NX20 251 aaKnown RBP12.89□□□□□ -0.35
SIPA1-201ENST00000394224 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
SIPA1-201ENST00000394224 PIEZO1Q92508 2521 aa12.88□□□□□ -0.35
SIPA1-201ENST00000394224 HOXB4P17483 251 aaPredicted RBP12.88□□□□□ -0.35
SIPA1-201ENST00000394224 PSMB2P49721 201 aa12.88□□□□□ -0.35
SIPA1-201ENST00000394224 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
SIPA1-201ENST00000394224 LYPD1Q8N2G4 141 aa12.88□□□□□ -0.35
SIPA1-201ENST00000394224 A0A1B0GW15 77 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 SAA4P35542 130 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 LAGE3Q14657 143 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 C8orf86Q6ZUL3 223 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 OR11H2Q8NH07 326 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 FBN2P35556 2912 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 TTC9CQ8N5M4 171 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
SIPA1-201ENST00000394224 ABCA2Q9BZC7 2435 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 CEND1Q8N111 149 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 PGPEP1Q9NXJ5 209 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 ZNF256Q9Y2P7 627 aaPredicted RBP12.86□□□□□ -0.35
SIPA1-201ENST00000394224 LY6LH3BQJ8 138 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 EDN2P20800 178 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 HIST2H2BDQ6DRA6 164 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 CLEC2AQ6UVW9 174 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 NXT2Q9NPJ8 142 aaKnown RBP12.86□□□□□ -0.35
SIPA1-201ENST00000394224 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
SIPA1-201ENST00000394224 IGLC6P0CF74 106 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.86□□□□□ -0.35
SIPA1-201ENST00000394224 BUB3O43684 328 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 UNQ9165/PRO28630Q6UXU0 137 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 SRSF8Q9BRL6 282 aaKnown RBP12.85□□□□□ -0.35
SIPA1-201ENST00000394224 ZNF575Q86XF7 245 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 METTL26Q96S19 204 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 SLC25A16P16260 332 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 RAXQ9Y2V3 346 aa12.85□□□□□ -0.35
SIPA1-201ENST00000394224 PDE6HQ13956 83 aa12.84□□□□□ -0.35
SIPA1-201ENST00000394224 IGLL5B9A064 214 aa12.84□□□□□ -0.35
SIPA1-201ENST00000394224 RPL39P62891 51 aaKnown RBP12.84□□□□□ -0.35
SIPA1-201ENST00000394224 ZFP2Q6ZN57 461 aa12.84□□□□□ -0.35
SIPA1-201ENST00000394224 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-201ENST00000394224 C20orf78Q9BR46 151 aa12.84□□□□□ -0.35
SIPA1-201ENST00000394224 LINC01549A6NIU2 74 aa12.83□□□□□ -0.35
SIPA1-201ENST00000394224 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.35
SIPA1-201ENST00000394224 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.35
SIPA1-201ENST00000394224 NIPBLQ6KC79 2804 aaeCLIP12.83□□□□□ -0.36
SIPA1-201ENST00000394224 C8orf31Q8N9H6 132 aa12.83□□□□□ -0.36
SIPA1-201ENST00000394224 DPF1Q92782 380 aa12.83□□□□□ -0.36
SIPA1-201ENST00000394224 PF4V1P10720 104 aa12.83□□□□□ -0.36
SIPA1-201ENST00000394224 NPC2P61916 151 aa12.83□□□□□ -0.36
SIPA1-201ENST00000394224 PLEKHB2Q96CS7 222 aa12.83□□□□□ -0.36
SIPA1-201ENST00000394224 RAX2Q96IS3 184 aa12.83□□□□□ -0.36
SIPA1-201ENST00000394224 IGHV3-73A0A0B4J1V6 119 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 PRTN3P24158 256 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 Q8N9W7 124 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 FN1P02751 2386 aaKnown RBP12.82□□□□□ -0.36
SIPA1-201ENST00000394224 RPS20P60866 119 aaKnown RBP12.82□□□□□ -0.36
SIPA1-201ENST00000394224 CCDC140Q96MF4 163 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 BPESC1Q9GZL8 116 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 U3KQK5 164 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 MTORP42345 2549 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 NF1P21359 2839 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 TRAV12-2A0A075B6T6 113 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 SCGB2A1O75556 95 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 C20orf173Q96LM9 149 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 MSRB2Q9Y3D2 182 aa12.82□□□□□ -0.36
SIPA1-201ENST00000394224 A0A1W2PPR1 153 aa12.81□□□□□ -0.36
SIPA1-201ENST00000394224 OR5A1Q8NGJ0 315 aa12.81□□□□□ -0.36
SIPA1-201ENST00000394224 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms