RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
SFXN3-202ENST00000393459 USP9YO00507 2555 aaPredicted RBP11.23□□□□□ -0.61
SFXN3-202ENST00000393459 PTPN13Q12923 2485 aa11.23□□□□□ -0.61
SFXN3-202ENST00000393459 F8W1H4 67 aa11.23□□□□□ -0.61
SFXN3-202ENST00000393459 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
SFXN3-202ENST00000393459 A0A0G2JNJ9 132 aa11.23□□□□□ -0.61
SFXN3-202ENST00000393459 SRD5A1P18405 259 aa11.23□□□□□ -0.61
SFXN3-202ENST00000393459 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
SFXN3-202ENST00000393459 Q9UFV3 132 aa11.23□□□□□ -0.61
SFXN3-202ENST00000393459 TLN2Q9Y4G6 2542 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 CLEC3BP05452 202 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 MFAP4P55083 255 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 PRR30Q53SZ7 412 aaPredicted RBP11.22□□□□□ -0.61
SFXN3-202ENST00000393459 MYO9AB2RTY4 2548 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 WNK1Q9H4A3 2382 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 HOXB4P17483 251 aaPredicted RBP11.22□□□□□ -0.61
SFXN3-202ENST00000393459 LAGE3Q14657 143 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 PRADC1Q9BSG0 188 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 IGHV3OR16-10A0A075B7F0 116 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 A0A1B0GW15 77 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 MRPS12O15235 138 aaKnown RBP11.22□□□□□ -0.61
SFXN3-202ENST00000393459 ZNF575Q86XF7 245 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 U3KQK5 164 aa11.22□□□□□ -0.61
SFXN3-202ENST00000393459 MUC6Q6W4X9 2439 aa11.21□□□□□ -0.61
SFXN3-202ENST00000393459 E7EQL1 145 aa11.21□□□□□ -0.61
SFXN3-202ENST00000393459 IGHG4P01861 327 aa11.21□□□□□ -0.61
SFXN3-202ENST00000393459 THBDP07204 575 aa11.21□□□□□ -0.61
SFXN3-202ENST00000393459 SMCPP49901 116 aaPredicted RBP11.21□□□□□ -0.61
SFXN3-202ENST00000393459 FANCD2OSQ96PS1 177 aa11.21□□□□□ -0.61
SFXN3-202ENST00000393459 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.61
SFXN3-202ENST00000393459 B5MCH6 92 aa11.21□□□□□ -0.62
SFXN3-202ENST00000393459 G3V318 75 aa11.21□□□□□ -0.62
SFXN3-202ENST00000393459 NBR2O15453 112 aa11.21□□□□□ -0.62
SFXN3-202ENST00000393459 GRNP28799 593 aaKnown RBP11.21□□□□□ -0.62
SFXN3-202ENST00000393459 DLX6P56179 175 aa11.21□□□□□ -0.62
SFXN3-202ENST00000393459 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.62
SFXN3-202ENST00000393459 CELSR2Q9HCU4 2923 aa11.21□□□□□ -0.62
SFXN3-202ENST00000393459 F6UB75 175 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 INS-IGF2F8WCM5 200 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 IGLV1-47P01700 117 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 NPC2P61916 151 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 FOXI1Q12951 378 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
SFXN3-202ENST00000393459 POLQO75417 2590 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 SPTBN4Q9H254 2564 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 CRYGBP07316 175 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 DPF1Q92782 380 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
SFXN3-202ENST00000393459 TMEM170BQ5T4T1 132 aa11.19□□□□□ -0.62
SFXN3-202ENST00000393459 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
SFXN3-202ENST00000393459 C15orf32Q32M92 178 aa11.19□□□□□ -0.62
SFXN3-202ENST00000393459 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
SFXN3-202ENST00000393459 JPT2Q9H910 190 aa11.18□□□□□ -0.62
SFXN3-202ENST00000393459 MYMXA0A1B0GTQ4 84 aa11.18□□□□□ -0.62
SFXN3-202ENST00000393459 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
SFXN3-202ENST00000393459 LGALS1P09382 135 aaKnown RBP11.18□□□□□ -0.62
SFXN3-202ENST00000393459 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
SFXN3-202ENST00000393459 FOXC1Q12948 553 aa11.18□□□□□ -0.62
SFXN3-202ENST00000393459 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
SFXN3-202ENST00000393459 Q6ZS46 218 aa11.18□□□□□ -0.62
SFXN3-202ENST00000393459 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
SFXN3-202ENST00000393459 F5H697 171 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 F8W735 103 aaPredicted RBP11.17□□□□□ -0.62
SFXN3-202ENST00000393459 ATP5LO75964 103 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 CTSGP08311 255 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 Q8N8P6 123 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 FAM57AQ8TBR7 257 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
SFXN3-202ENST00000393459 Q1RN00 199 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 ANAPC13Q9BS18 74 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 A0A087WX48 190 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
SFXN3-202ENST00000393459 PRR9Q5T870 116 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 CDIP1Q9H305 208 aa11.17□□□□□ -0.62
SFXN3-202ENST00000393459 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
SFXN3-202ENST00000393459 IGHV4-39P01824 125 aa11.16□□□□□ -0.62
SFXN3-202ENST00000393459 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
SFXN3-202ENST00000393459 PRO0461Q9UI25 63 aa11.16□□□□□ -0.62
SFXN3-202ENST00000393459 A0A087WWL8 130 aa11.16□□□□□ -0.62
SFXN3-202ENST00000393459 LINC00311Q8N616 119 aa11.16□□□□□ -0.62
SFXN3-202ENST00000393459 TSPAN13O95857 204 aa11.15□□□□□ -0.62
SFXN3-202ENST00000393459 SPATA25Q9BR10 227 aa11.15□□□□□ -0.62
SFXN3-202ENST00000393459 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.62
SFXN3-202ENST00000393459 GNRH2O43555 120 aa11.15□□□□□ -0.62
SFXN3-202ENST00000393459 TCL1BO95988 128 aa11.15□□□□□ -0.62
SFXN3-202ENST00000393459 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.62
SFXN3-202ENST00000393459 Q6ZUT4 128 aa11.15□□□□□ -0.62
SFXN3-202ENST00000393459 DLX4Q92988 240 aaPredicted RBP11.15□□□□□ -0.62
SFXN3-202ENST00000393459 HIGD1BQ9P298 99 aa11.15□□□□□ -0.62
SFXN3-202ENST00000393459 TRAV8-2A0A0B4J237 113 aa11.15□□□□□ -0.63
SFXN3-202ENST00000393459 C5orf64Q2M2E5 130 aa11.15□□□□□ -0.63
SFXN3-202ENST00000393459 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.63
SFXN3-202ENST00000393459 TMEM219Q86XT9 240 aa11.15□□□□□ -0.63
SFXN3-202ENST00000393459 LYPD1Q8N2G4 141 aa11.15□□□□□ -0.63
SFXN3-202ENST00000393459 TRBV7-3A0A075B6L6 115 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms