RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 OR1N2Q8NGR9 330 aa13.17□□□□□ -0.3
RUFY1-203ENST00000393448 DPF1Q92782 380 aa13.17□□□□□ -0.3
RUFY1-203ENST00000393448 CD28P10747 220 aa13.17□□□□□ -0.3
RUFY1-203ENST00000393448 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
RUFY1-203ENST00000393448 WFDC12Q8WWY7 111 aa13.17□□□□□ -0.3
RUFY1-203ENST00000393448 BATFQ16520 125 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 LINC01006Q8NI28 216 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 C18orf32Q8TCD1 76 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 LINC00477Q96M19 166 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 ALKBH7Q9BT30 221 aaPredicted RBP13.16□□□□□ -0.3
RUFY1-203ENST00000393448 PAM16Q9Y3D7 125 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 ID1P41134 155 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 RIGQ13278 110 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 LINC01559Q495D7 138 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 Q6AWC8 147 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 FER1L6-AS1Q8NA97 138 aa13.16□□□□□ -0.3
RUFY1-203ENST00000393448 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
RUFY1-203ENST00000393448 AGRNO00468 2067 aa13.15□□□□□ -0.3
RUFY1-203ENST00000393448 IGLC6P0CF74 106 aa13.15□□□□□ -0.3
RUFY1-203ENST00000393448 ESDP10768 282 aa13.15□□□□□ -0.3
RUFY1-203ENST00000393448 OR10J3Q5JRS4 329 aa13.15□□□□□ -0.3
RUFY1-203ENST00000393448 ZNF418Q8TF45 676 aaPredicted RBP13.15□□□□□ -0.3
RUFY1-203ENST00000393448 HIVEP1P15822 2718 aa13.14□□□□□ -0.31
RUFY1-203ENST00000393448 HILS1P60008 231 aa13.14□□□□□ -0.31
RUFY1-203ENST00000393448 COL5A1-AS1Q5SY13 56 aa13.14□□□□□ -0.31
RUFY1-203ENST00000393448 BORCS7Q96B45 105 aa13.14□□□□□ -0.31
RUFY1-203ENST00000393448 VAMP8Q9BV40 100 aa13.14□□□□□ -0.31
RUFY1-203ENST00000393448 RPS20P60866 119 aaKnown RBP13.14□□□□□ -0.31
RUFY1-203ENST00000393448 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
RUFY1-203ENST00000393448 TMEM160Q9NX00 188 aa13.14□□□□□ -0.31
RUFY1-203ENST00000393448 NSD1Q96L73 2696 aaPredicted RBP13.13□□□□□ -0.31
RUFY1-203ENST00000393448 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
RUFY1-203ENST00000393448 K7EQG2 157 aa13.13□□□□□ -0.31
RUFY1-203ENST00000393448 OR9G4Q8NGQ1 327 aa13.13□□□□□ -0.31
RUFY1-203ENST00000393448 MSRB1Q9NZV6 116 aa13.13□□□□□ -0.31
RUFY1-203ENST00000393448 TCF21O43680 179 aa13.13□□□□□ -0.31
RUFY1-203ENST00000393448 SCGB2A2Q13296 93 aa13.13□□□□□ -0.31
RUFY1-203ENST00000393448 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
RUFY1-203ENST00000393448 GPX1P07203 203 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 NTF3P20783 257 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 RNASE4P34096 147 aaKnown RBP13.12□□□□□ -0.31
RUFY1-203ENST00000393448 CTRLP40313 264 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 RAX2Q96IS3 184 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 FAM19A4Q96LR4 140 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 NIPBLQ6KC79 2804 aaeCLIP13.12□□□□□ -0.31
RUFY1-203ENST00000393448 M0QZ24 198 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 TWIST1Q15672 202 aa13.12□□□□□ -0.31
RUFY1-203ENST00000393448 FLNBO75369 2602 aaKnown RBP13.12□□□□□ -0.31
RUFY1-203ENST00000393448 IGKV3-20P01619 116 aa13.11□□□□□ -0.31
RUFY1-203ENST00000393448 INAFM1C9JVW0 142 aa13.11□□□□□ -0.31
RUFY1-203ENST00000393448 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
RUFY1-203ENST00000393448 FAM19A2Q8N3H0 131 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 SAMD10Q9BYL1 202 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 C16orf95Q9H693 158 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 PMCHP20382 165 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 SAMD13Q5VXD3 122 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 AMN1Q8IY45 258 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 GATD1Q8NB37 220 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
RUFY1-203ENST00000393448 A0A1B0GW15 77 aa13.09□□□□□ -0.31
RUFY1-203ENST00000393448 CSN3P07498 182 aa13.09□□□□□ -0.31
RUFY1-203ENST00000393448 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
RUFY1-203ENST00000393448 SPRY2O43597 315 aa13.08□□□□□ -0.31
RUFY1-203ENST00000393448 ZNF493Q6ZR52 646 aa13.08□□□□□ -0.31
RUFY1-203ENST00000393448 TMEM61Q8N0U2 210 aa13.08□□□□□ -0.31
RUFY1-203ENST00000393448 OR10AG1Q8NH19 301 aa13.08□□□□□ -0.31
RUFY1-203ENST00000393448 URB1-AS1Q96HZ7 61 aa13.08□□□□□ -0.31
RUFY1-203ENST00000393448 TIMM8BQ9Y5J9 83 aaPredicted RBP13.08□□□□□ -0.32
RUFY1-203ENST00000393448 TRAV21A0A0B4J279 112 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 RNASEKQ6P5S7 137 aaKnown RBP13.07□□□□□ -0.32
RUFY1-203ENST00000393448 RNF114Q9Y508 228 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 A0A0J9YX75 114 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 H3BVH4 76 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 CCL24O00175 119 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 AMTP48728 403 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 ANXA2RQ3ZCQ2 193 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 Q8N976 141 aa13.07□□□□□ -0.32
RUFY1-203ENST00000393448 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 NIT1Q86X76 327 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 CNFNQ9BYD5 112 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 RBX1P62877 108 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 FHL3Q13643 280 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 STPG4Q8N801 248 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 DYNLRB2Q8TF09 96 aa13.06□□□□□ -0.32
RUFY1-203ENST00000393448 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 C20orf202A1L168 122 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 KLLNB2CW77 178 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 M0R2Z0 102 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
RUFY1-203ENST00000393448 TSSC4Q9Y5U2 329 aaPredicted RBP13.05□□□□□ -0.32
RUFY1-203ENST00000393448 D6R8Y8 96 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 GNRH2O43555 120 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
RUFY1-203ENST00000393448 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms