RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 STHQ8IWL8 128 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 SSBP4Q9BWG4 385 aaPredicted RBP5.91□□□□□ -1.46
ERCC8-202ENST00000381118 TIMM8BQ9Y5J9 83 aaPredicted RBP5.91□□□□□ -1.46
ERCC8-202ENST00000381118 TRBV7-9A0A0J9YWB2 115 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 C7orf71A4D174 169 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 FAM231BA6NCW3 169 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 ANXA2RQ3ZCQ2 193 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 C9orf66Q5T8R8 295 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 Q6AWC8 147 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 FER1L6-AS1Q8NA97 138 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 ZNF747Q9BV97 191 aa5.91□□□□□ -1.46
ERCC8-202ENST00000381118 SPRY2O43597 315 aa5.9□□□□□ -1.46
ERCC8-202ENST00000381118 TRGC1P0CF51 173 aa5.9□□□□□ -1.46
ERCC8-202ENST00000381118 IGLL1P15814 213 aa5.9□□□□□ -1.46
ERCC8-202ENST00000381118 FOXA3P55318 350 aaPredicted RBP5.9□□□□□ -1.46
ERCC8-202ENST00000381118 RPS20P60866 119 aaKnown RBP5.9□□□□□ -1.46
ERCC8-202ENST00000381118 HBBP68871 147 aa5.9□□□□□ -1.46
ERCC8-202ENST00000381118 OR2K2Q8NGT1 345 aa5.9□□□□□ -1.46
ERCC8-202ENST00000381118 ODF3Q96PU9 254 aa5.9□□□□□ -1.46
ERCC8-202ENST00000381118 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
ERCC8-202ENST00000381118 A0A1B0GUT8 65 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 H3BVH4 76 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 GNRH2O43555 120 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BKO60814 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BJP06899 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HTN1P15515 57 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BOP23527 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 TSPOP30536 169 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BBP33778 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BDP58876 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BCP62807 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 BEAN1Q3B7T3 259 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 KIAA1644Q3SXP7 199 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.47
ERCC8-202ENST00000381118 FAM159AQ6UWV7 190 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 TMEM136Q6ZRR5 245 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 TMEM158Q8WZ71 300 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 BORCS7Q96B45 105 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.47
ERCC8-202ENST00000381118 MUC4Q99102 2169 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 A0A1B0GXF2 115 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 PHOX2AO14813 284 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 CRXO43186 299 aaPredicted RBP5.89□□□□□ -1.47
ERCC8-202ENST00000381118 ZNF324O75467 553 aaPredicted RBP5.89□□□□□ -1.47
ERCC8-202ENST00000381118 IGLC6P0CF74 106 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 RBMY1A1P0DJD3 496 aaKnown RBP5.89□□□□□ -1.47
ERCC8-202ENST00000381118 RBMY1CP0DJD4 496 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 S100A4P26447 101 aaKnown RBP5.89□□□□□ -1.47
ERCC8-202ENST00000381118 INSL3P51460 131 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 SLAQ13239 276 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
ERCC8-202ENST00000381118 TWIST1Q15672 202 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 WDR73Q6P4I2 378 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 ATP5L2Q7Z4Y8 100 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 TP53TG3Q9ULZ0 132 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 ANK2Q01484 3957 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 PKD1L1Q8TDX9 2849 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 S100A6P06703 90 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 NTF3P20783 257 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 OR10AG1Q8NH19 301 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 C19orf73Q9NVV2 129 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 MSRB1Q9NZV6 116 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 XCL2Q9UBD3 114 aa5.89□□□□□ -1.47
ERCC8-202ENST00000381118 HLA-DQA1P01909 254 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 PRM2P04554 102 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 RPL35AP18077 110 aaKnown RBP5.88□□□□□ -1.47
ERCC8-202ENST00000381118 CTRLP40313 264 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 ASIPP42127 132 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 RIGQ13278 110 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 GTSCR1Q86UQ5 136 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 DEFB125Q8N687 156 aa5.88□□□□□ -1.47
ERCC8-202ENST00000381118 IGHV3OR16-12A0A075B7B8 117 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 APCSP02743 223 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 MT-ND6P03923 174 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 NDUFA6P56556 154 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 RASL11AQ6T310 242 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 TRPT1Q86TN4 253 aaKnown RBP5.87□□□□□ -1.47
ERCC8-202ENST00000381118 A8MTW9 85 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 M0R381 172 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 CMC4P56277 68 aaPredicted RBP5.87□□□□□ -1.47
ERCC8-202ENST00000381118 SNRPEP62304 92 aaKnown RBP5.87□□□□□ -1.47
ERCC8-202ENST00000381118 COX19Q49B96 90 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 OXLD1Q5BKU9 147 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 Q8N1Y9 231 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 WFDC9Q8NEX5 89 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 KCNS1Q96KK3 526 aa5.87□□□□□ -1.47
ERCC8-202ENST00000381118 MCRIP2Q9BUT9 160 aaKnown RBP5.87□□□□□ -1.47
ERCC8-202ENST00000381118 IGHV1OR15-1A0A075B7D0 117 aa5.86□□□□□ -1.47
ERCC8-202ENST00000381118 CBY3A6NI87 242 aa5.86□□□□□ -1.47
ERCC8-202ENST00000381118 F2Z2F3 143 aa5.86□□□□□ -1.47
ERCC8-202ENST00000381118 RNASE3P12724 160 aaKnown RBP5.86□□□□□ -1.47
ERCC8-202ENST00000381118 NUTF2P61970 127 aaKnown RBP5.86□□□□□ -1.47
ERCC8-202ENST00000381118 TMEM208Q9BTX3 173 aa5.86□□□□□ -1.47
ERCC8-202ENST00000381118 PHLDA3Q9Y5J5 127 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms