RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 TET1Q8NFU7 2136 aa13.39□□□□□ -0.27
COL4A3BP-203ENST00000380494 C11orf53Q8IXP5 236 aa13.39□□□□□ -0.27
COL4A3BP-203ENST00000380494 CTRLP40313 264 aa13.39□□□□□ -0.27
COL4A3BP-203ENST00000380494 PATE2Q6UY27 113 aa13.39□□□□□ -0.27
COL4A3BP-203ENST00000380494 I3L2K1 104 aa13.39□□□□□ -0.27
COL4A3BP-203ENST00000380494 GNRH2O43555 120 aa13.39□□□□□ -0.27
COL4A3BP-203ENST00000380494 RUSC1-AS1Q66K80 236 aa13.39□□□□□ -0.27
COL4A3BP-203ENST00000380494 MED14OSP0DP75 135 aa13.38□□□□□ -0.27
COL4A3BP-203ENST00000380494 NLRC5Q86WI3 1866 aa13.38□□□□□ -0.27
COL4A3BP-203ENST00000380494 PSMB8P28062 276 aa13.38□□□□□ -0.27
COL4A3BP-203ENST00000380494 BAALCQ8WXS3 180 aa13.38□□□□□ -0.27
COL4A3BP-203ENST00000380494 TIMM17AQ99595 171 aa13.37□□□□□ -0.27
COL4A3BP-203ENST00000380494 ODF1Q14990 250 aa13.37□□□□□ -0.27
COL4A3BP-203ENST00000380494 C2orf70A6NJV1 201 aa13.37□□□□□ -0.27
COL4A3BP-203ENST00000380494 C5orf47Q569G3 176 aa13.37□□□□□ -0.27
COL4A3BP-203ENST00000380494 CRYGCP07315 174 aa13.37□□□□□ -0.27
COL4A3BP-203ENST00000380494 RNASE13Q5GAN3 156 aaKnown RBP13.37□□□□□ -0.27
COL4A3BP-203ENST00000380494 RPL39LQ96EH5 51 aaKnown RBP13.37□□□□□ -0.27
COL4A3BP-203ENST00000380494 MSMBP08118 114 aa13.36□□□□□ -0.27
COL4A3BP-203ENST00000380494 NPBQ8NG41 125 aa13.36□□□□□ -0.27
COL4A3BP-203ENST00000380494 UBE2DNLQ8IWF7 75 aa13.36□□□□□ -0.27
COL4A3BP-203ENST00000380494 SVIPQ8NHG7 77 aa13.36□□□□□ -0.27
COL4A3BP-203ENST00000380494 RLFQ13129 1914 aa13.36□□□□□ -0.27
COL4A3BP-203ENST00000380494 RNF152Q8N8N0 203 aa13.36□□□□□ -0.27
COL4A3BP-203ENST00000380494 SCN5AQ14524 2016 aa13.36□□□□□ -0.27
COL4A3BP-203ENST00000380494 MRPL23Q16540 153 aaKnown RBP13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 FGF23Q9GZV9 251 aaPredicted RBP13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 RS1O15537 224 aa13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 RNF138Q8WVD3 245 aa13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 LGALS9O00182 355 aa13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 JMJD7-PLA2G4BH0Y9G9 81 aa13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 DAD1P61803 113 aa13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 CFHR3Q02985 330 aa13.35□□□□□ -0.27
COL4A3BP-203ENST00000380494 LHBP01229 141 aa13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 Q6ZUT4 128 aa13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 MDC1Q14676 2089 aaKnown RBP13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 RNF114Q9Y508 228 aa13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 WI2-2373I1.2A0A1W2PRP0 233 aa13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 IGKV2-29A2NJV5 120 aaPredicted RBP13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 C19orf71A6NCJ1 209 aa13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 PSCAO43653 123 aa13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 THSD7BQ9C0I4 1608 aa13.34□□□□□ -0.27
COL4A3BP-203ENST00000380494 IGFL3Q6UXB1 125 aa13.33□□□□□ -0.27
COL4A3BP-203ENST00000380494 LY6HO94772 140 aa13.33□□□□□ -0.28
COL4A3BP-203ENST00000380494 A0A1B0GXF2 115 aa13.33□□□□□ -0.28
COL4A3BP-203ENST00000380494 hADV29S1A0JD25 119 aa13.33□□□□□ -0.28
COL4A3BP-203ENST00000380494 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.28
COL4A3BP-203ENST00000380494 DOCK11Q5JSL3 2073 aa13.33□□□□□ -0.28
COL4A3BP-203ENST00000380494 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
COL4A3BP-203ENST00000380494 LINC00643Q86TS7 51 aa13.32□□□□□ -0.28
COL4A3BP-203ENST00000380494 SND1-IT1Q9HBX3 110 aa13.32□□□□□ -0.28
COL4A3BP-203ENST00000380494 NDUFA11Q86Y39 141 aa13.32□□□□□ -0.28
COL4A3BP-203ENST00000380494 C22orf46C9J442 243 aa13.32□□□□□ -0.28
COL4A3BP-203ENST00000380494 IGKV3D-7A0A0C4DH55 119 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 K7EIM0 57 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 RNF183Q96D59 192 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 ELANEP08246 267 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 LY6G6EA0A0G2JKS1 128 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 MSRB1Q9NZV6 116 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 U3KQA8 63 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 IGLV11-55A0A075B6I3 123 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 IGLV2-14P01704 120 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 YPEL4Q96NS1 127 aa13.31□□□□□ -0.28
COL4A3BP-203ENST00000380494 C9orf47Q6ZRZ4 202 aa13.3□□□□□ -0.28
COL4A3BP-203ENST00000380494 A0A0J9YXV3 536 aa13.3□□□□□ -0.28
COL4A3BP-203ENST00000380494 NDUFV3P56181 108 aaKnown RBP13.3□□□□□ -0.28
COL4A3BP-203ENST00000380494 SNRNP200O75643 2136 aaKnown RBP13.3□□□□□ -0.28
COL4A3BP-203ENST00000380494 HOXB4P17483 251 aaPredicted RBP13.3□□□□□ -0.28
COL4A3BP-203ENST00000380494 F5H768 121 aa13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 J3QLI3 93 aa13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 FUSP35637 526 aaKnown RBP eCLIP13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 TCF20Q9UGU0 1960 aaKnown RBP13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 IGKV1-17P01599 117 aa13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 TTTY13Q9BZ97 58 aa13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 SPANXB1Q9NS25 103 aaPredicted RBP13.29□□□□□ -0.28
COL4A3BP-203ENST00000380494 COX7B2Q8TF08 81 aa13.28□□□□□ -0.28
COL4A3BP-203ENST00000380494 RMI2Q96E14 147 aa13.28□□□□□ -0.28
COL4A3BP-203ENST00000380494 OPRPNQ99935 248 aaPredicted RBP13.28□□□□□ -0.28
COL4A3BP-203ENST00000380494 DENND4AQ7Z401 1863 aa13.28□□□□□ -0.28
COL4A3BP-203ENST00000380494 CRYGBP07316 175 aa13.28□□□□□ -0.28
COL4A3BP-203ENST00000380494 U3KQE9 123 aa13.28□□□□□ -0.28
COL4A3BP-203ENST00000380494 ARHGEF17Q96PE2 2063 aaPredicted RBP13.28□□□□□ -0.28
COL4A3BP-203ENST00000380494 C16orf54Q6UWD8 224 aa13.27□□□□□ -0.28
COL4A3BP-203ENST00000380494 FANCMQ8IYD8 2048 aa13.27□□□□□ -0.28
COL4A3BP-203ENST00000380494 TRAV4A0A0B4J268 109 aa13.27□□□□□ -0.28
COL4A3BP-203ENST00000380494 TCL1BO95988 128 aa13.27□□□□□ -0.28
COL4A3BP-203ENST00000380494 FRMD6-AS1P0C7T7 363 aa13.27□□□□□ -0.29
COL4A3BP-203ENST00000380494 CHD3Q12873 2000 aaKnown RBP13.27□□□□□ -0.29
COL4A3BP-203ENST00000380494 APOC4P55056 127 aa13.26□□□□□ -0.29
COL4A3BP-203ENST00000380494 PHF3Q92576 2039 aaKnown RBP13.26□□□□□ -0.29
COL4A3BP-203ENST00000380494 K7EQD1 137 aa13.26□□□□□ -0.29
COL4A3BP-203ENST00000380494 ANGP03950 147 aaKnown RBP13.26□□□□□ -0.29
COL4A3BP-203ENST00000380494 UQCRQO14949 82 aa13.26□□□□□ -0.29
COL4A3BP-203ENST00000380494 TMEM61Q8N0U2 210 aa13.26□□□□□ -0.29
COL4A3BP-203ENST00000380494 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
COL4A3BP-203ENST00000380494 TM2D2Q9BX73 214 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms