RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 MINOS1Q5TGZ0 78 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 MINOS1-NBL1R4GNA1 71 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 EYSQ5T1H1 3165 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 TRBV7-1A0A0A6YYK4 115 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 CTSGP08311 255 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
SMAD9-202ENST00000379826 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 REV3LO60673 3130 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 DGAT2L7PQ6IED9 249 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 IGKV3D-20A0A0C4DH25 116 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 FCN3O75636 299 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 CKS1BP61024 79 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 C2orf66Q6UXQ4 117 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 OTOGLQ3ZCN5 2332 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 A0A087WX48 190 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 HLA-DRB4P13762 266 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 ANXA2RQ3ZCQ2 193 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 NPBQ8NG41 125 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 RPL39LQ96EH5 51 aaKnown RBP8.83□□□□□ -1
SMAD9-202ENST00000379826 HLA-DRB4X5D2U9 266 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 F6UB75 175 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 OVOL1O14753 267 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 CRYGBP07316 175 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 TP53TG1Q9Y2A0 90 aa8.83□□□□□ -1
SMAD9-202ENST00000379826 NPFFO15130 113 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 LINC01559Q495D7 138 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 KLHL30-AS1Q8NEE0 82 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 TMEM238C9JI98 176 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 DEFB1P60022 68 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 NOTCH2Q04721 2471 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 G3V4G9 280 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 PPP1R17O96001 155 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 SUMO2P61956 95 aaKnown RBP8.82□□□□□ -1
SMAD9-202ENST00000379826 LINC01549A6NIU2 74 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 H3BUX3 64 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 DLX4Q92988 240 aaPredicted RBP8.82□□□□□ -1
SMAD9-202ENST00000379826 MOB4Q9Y3A3 225 aa8.82□□□□□ -1
SMAD9-202ENST00000379826 TRAV8-2A0A0B4J237 113 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 GAGE12HA6NDE8 117 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 PRADC1Q9BSG0 188 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 IGLL5B9A064 214 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 GNRH2O43555 120 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 GAS8-AS1O95177 125 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 SNRPD3P62318 126 aaKnown RBP8.81□□□□□ -1
SMAD9-202ENST00000379826 ODF1Q14990 250 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 C9orf139Q6ZV77 190 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 MRAP2Q96G30 205 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 IGHV7-81A0A0B4J1V7 117 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 TRBV6-1A0A0K0K1D8 114 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 F8W1H4 67 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 FSTL3O95633 263 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 FANCD2OSQ96PS1 177 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 FAM208BQ5VWN6 2430 aa8.81□□□□□ -1
SMAD9-202ENST00000379826 WFDC2Q14508 124 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 LINC00477Q96M19 166 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 SMIM2Q9BVW6 85 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 IGKV2D-26A0A0A0MRZ7 120 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 OR11H6Q8NGC7 330 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 PLXNB1O43157 2135 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 OOSP1A8MZH6 123 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 TRIOO75962 3097 aa8.8□□□□□ -1
SMAD9-202ENST00000379826 A8MWV9 139 aa8.79□□□□□ -1
SMAD9-202ENST00000379826 RHPN1-AS1Q9BWJ2 59 aa8.79□□□□□ -1
SMAD9-202ENST00000379826 SNCGO76070 127 aa8.79□□□□□ -1
SMAD9-202ENST00000379826 SPINK8P0C7L1 97 aa8.79□□□□□ -1
SMAD9-202ENST00000379826 ZNF688P0C7X2 276 aa8.79□□□□□ -1
SMAD9-202ENST00000379826 VCX2Q9H322 139 aa8.79□□□□□ -1
SMAD9-202ENST00000379826 F8VRH5 84 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 ADORA2A-AS1P86434 159 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 TTC32Q5I0X7 151 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 MALRD1Q5VYJ5 2156 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 ABCA1O95477 2261 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 OVOL3O00110 214 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 C1orf122Q6ZSJ8 110 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 KLK9Q9UKQ9 250 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 SMAD5-AS1Q9Y6J3 95 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 DSCAMO60469 2012 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 PCNX2A6NKB5 2137 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 SPTAN1Q13813 2472 aaKnown RBP8.78□□□□□ -1
SMAD9-202ENST00000379826 UBE2E1P51965 193 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
SMAD9-202ENST00000379826 CD28P10747 220 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 ZFP36P26651 326 aaKnown RBP8.77□□□□□ -1.01
SMAD9-202ENST00000379826 STHQ8IWL8 128 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 ANAPC13Q9BS18 74 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 PRSS29PA6NIE9 313 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 FAM223BA6NKX1 122 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 BUB3O43684 328 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 FAM223AQ8IWN6 122 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 PCNX1Q96RV3 2341 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 LY6G6DO95868 133 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 PAPPA-AS1Q5QFB9 102 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 DUX3Q96PT4 197 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 U3KQK5 164 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 COX6CP09669 75 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 RNF185Q96GF1 192 aa8.77□□□□□ -1.01
SMAD9-202ENST00000379826 GEMIN7Q9H840 131 aaKnown RBP8.77□□□□□ -1.01
SMAD9-202ENST00000379826 FOXI2Q6ZQN5 318 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms