RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
PCDHA6-201ENST00000378126 NF1P21359 2839 aa10.56□□□□□ -0.72
PCDHA6-201ENST00000378126 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 MAP1LC3AQ9H492 121 aa10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 MSMBP08118 114 aa10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 RPS20P60866 119 aaKnown RBP10.55□□□□□ -0.72
PCDHA6-201ENST00000378126 MGPP08493 103 aa10.54□□□□□ -0.72
PCDHA6-201ENST00000378126 C7orf71A4D174 169 aa10.54□□□□□ -0.72
PCDHA6-201ENST00000378126 PCP2Q8IVA1 136 aa10.54□□□□□ -0.72
PCDHA6-201ENST00000378126 TMEM158Q8WZ71 300 aa10.54□□□□□ -0.72
PCDHA6-201ENST00000378126 CLUHP3Q96NS8 147 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 K7EMI3 77 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 GNRH2O43555 120 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 NPFFR1Q9GZQ6 430 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 RAB9AP51151 201 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 NEGR1Q7Z3B1 354 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 C14orf178Q8N769 122 aaPredicted RBP10.53□□□□□ -0.72
PCDHA6-201ENST00000378126 TGFAP01135 160 aa10.52□□□□□ -0.72
PCDHA6-201ENST00000378126 ACANP16112 2415 aa10.52□□□□□ -0.72
PCDHA6-201ENST00000378126 FOXC2Q99958 501 aa10.52□□□□□ -0.72
PCDHA6-201ENST00000378126 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
PCDHA6-201ENST00000378126 OR10J6PQ8NGY7 276 aa10.52□□□□□ -0.73
PCDHA6-201ENST00000378126 MTORP42345 2549 aa10.52□□□□□ -0.73
PCDHA6-201ENST00000378126 BVES-AS1Q5T3Y7 98 aa10.52□□□□□ -0.73
PCDHA6-201ENST00000378126 RAB37Q96AX2 223 aa10.52□□□□□ -0.73
PCDHA6-201ENST00000378126 COX11Q9Y6N1 276 aa10.52□□□□□ -0.73
PCDHA6-201ENST00000378126 U3KQK5 164 aa10.52□□□□□ -0.73
PCDHA6-201ENST00000378126 IGHV7-4-1A0A0J9YVY3 117 aa10.51□□□□□ -0.73
PCDHA6-201ENST00000378126 CDKN1BP46527 198 aa10.51□□□□□ -0.73
PCDHA6-201ENST00000378126 DEFB112Q30KQ8 113 aa10.51□□□□□ -0.73
PCDHA6-201ENST00000378126 TMEM238C9JI98 176 aa10.51□□□□□ -0.73
PCDHA6-201ENST00000378126 FAM223BA6NKX1 122 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 ANXA2RQ3ZCQ2 193 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 FAM223AQ8IWN6 122 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 TMEM160Q9NX00 188 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 GTSCR1Q86UQ5 136 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 OR2K2Q8NGT1 345 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 HTN1P15515 57 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 MRPL52Q86TS9 123 aaKnown RBP10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 GATD1Q8NB37 220 aa10.5□□□□□ -0.73
PCDHA6-201ENST00000378126 TRAV12-2A0A075B6T6 113 aa10.49□□□□□ -0.73
PCDHA6-201ENST00000378126 K7EP13 123 aa10.49□□□□□ -0.73
PCDHA6-201ENST00000378126 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
PCDHA6-201ENST00000378126 PRRC2AP48634 2157 aaKnown RBP10.49□□□□□ -0.73
PCDHA6-201ENST00000378126 A6NDX4 124 aa10.49□□□□□ -0.73
PCDHA6-201ENST00000378126 C2orf91Q6ZV80 131 aa10.49□□□□□ -0.73
PCDHA6-201ENST00000378126 JPT2Q9H910 190 aa10.49□□□□□ -0.73
PCDHA6-201ENST00000378126 RNF223E7ERA6 249 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 IGHG2P01859 326 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 COX8AP10176 69 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 U3KQE9 123 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 IGKV2D-26A0A0A0MRZ7 120 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 C9orf139Q6ZV77 190 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 CHD6Q8TD26 2715 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 C9orf47Q6ZRZ4 202 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 COX8CQ7Z4L0 72 aa10.48□□□□□ -0.73
PCDHA6-201ENST00000378126 TRAV12-3A0A0B4J271 114 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 SMIM17P0DL12 118 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 ZFAND2AQ8N6M9 145 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 RBAKDNA6NC62 111 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 NDUFA4O00483 81 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 TAX1BP3O14907 124 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 CIDEAO60543 219 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 C19orf54Q5BKX5 351 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 MEGF9Q9H1U4 602 aa10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 BEX4Q9NWD9 120 aaPredicted RBP10.47□□□□□ -0.73
PCDHA6-201ENST00000378126 A0A087WWL8 130 aa10.46□□□□□ -0.73
PCDHA6-201ENST00000378126 B4DSR2 109 aa10.46□□□□□ -0.73
PCDHA6-201ENST00000378126 KRTAP10-9P60411 292 aa10.46□□□□□ -0.73
PCDHA6-201ENST00000378126 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.73
PCDHA6-201ENST00000378126 DUX3Q96PT4 197 aa10.46□□□□□ -0.73
PCDHA6-201ENST00000378126 DEFB136Q30KP8 78 aa10.46□□□□□ -0.73
PCDHA6-201ENST00000378126 JMJD1CQ15652 2540 aa10.46□□□□□ -0.73
PCDHA6-201ENST00000378126 TRAV8-6A0A0B4J262 113 aa10.46□□□□□ -0.74
PCDHA6-201ENST00000378126 PSMG4Q5JS54 123 aa10.46□□□□□ -0.74
PCDHA6-201ENST00000378126 MS4A6AQ9H2W1 248 aa10.46□□□□□ -0.74
PCDHA6-201ENST00000378126 C2CD3Q4AC94 2353 aa10.46□□□□□ -0.74
PCDHA6-201ENST00000378126 CD5LO43866 347 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 SYNJ2BPP57105 145 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 KHDC1LQ5JSQ8 128 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 C12orf54Q6X4T0 127 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 BBC3Q96PG8 261 aaPredicted RBP10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 PSMG3-AS1Q96PY0 264 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 NOTCH2Q04721 2471 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 F5H697 171 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 FCER1GP30273 86 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 LGALS9CQ6DKI2 356 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
PCDHA6-201ENST00000378126 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms