RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 TMEM160Q9NX00 188 aa13.2□□□□□ -0.3
TRIM27-201ENST00000377194 CELSR2Q9HCU4 2923 aa13.2□□□□□ -0.3
TRIM27-201ENST00000377194 IGHG4P01861 327 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
TRIM27-201ENST00000377194 MSRB1Q9NZV6 116 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 IGKCP01834 107 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 GATA3P23771 443 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 TM2D2Q9BX73 214 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 AGRNO00468 2067 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 USP9XQ93008 2570 aaPredicted RBP13.19□□□□□ -0.3
TRIM27-201ENST00000377194 IGSF10Q6WRI0 2623 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 CSMD2Q7Z408 3487 aa13.19□□□□□ -0.3
TRIM27-201ENST00000377194 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
TRIM27-201ENST00000377194 CRYBG3Q68DQ2 2970 aa13.18□□□□□ -0.3
TRIM27-201ENST00000377194 TMEM8BA6NDV4 472 aa13.18□□□□□ -0.3
TRIM27-201ENST00000377194 SFTA2Q6UW10 78 aa13.18□□□□□ -0.3
TRIM27-201ENST00000377194 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
TRIM27-201ENST00000377194 PRO0461Q9UI25 63 aa13.18□□□□□ -0.3
TRIM27-201ENST00000377194 APOMO95445 188 aa13.17□□□□□ -0.3
TRIM27-201ENST00000377194 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
TRIM27-201ENST00000377194 CCDC140Q96MF4 163 aa13.17□□□□□ -0.3
TRIM27-201ENST00000377194 TRAV40A0A0B4J280 105 aa13.17□□□□□ -0.3
TRIM27-201ENST00000377194 MT-ATP8P03928 68 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 Q8TAT8 98 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 HIST1H4GQ99525 98 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 IGHV4-61A0A0C4DH41 118 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 SPINK8P0C7L1 97 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 CLEC19AQ6UXS0 136 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 BRD3OSQ6XYD6 125 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 GLMPQ8WWB7 406 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 IGHV3-66A0A0C4DH42 116 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 MRPL16Q9NX20 251 aaKnown RBP13.16□□□□□ -0.3
TRIM27-201ENST00000377194 LINC00527Q9UJ94 153 aa13.16□□□□□ -0.3
TRIM27-201ENST00000377194 UTP20O75691 2785 aaKnown RBP13.15□□□□□ -0.3
TRIM27-201ENST00000377194 IGHV3OR16-13A0A075B7E8 117 aa13.15□□□□□ -0.3
TRIM27-201ENST00000377194 IGHV3-74A0A0B4J1X5 117 aa13.15□□□□□ -0.3
TRIM27-201ENST00000377194 KLK9Q2XQG4 91 aa13.15□□□□□ -0.3
TRIM27-201ENST00000377194 C8orf86Q6ZUL3 223 aa13.15□□□□□ -0.3
TRIM27-201ENST00000377194 PIFOQ8TCI5 191 aa13.15□□□□□ -0.3
TRIM27-201ENST00000377194 ZMAT4Q9H898 229 aa13.15□□□□□ -0.3
TRIM27-201ENST00000377194 KLK9Q9UKQ9 250 aa13.15□□□□□ -0.3
TRIM27-201ENST00000377194 CLPSL1A2RUU4 121 aa13.15□□□□□ -0.31
TRIM27-201ENST00000377194 BUB3O43684 328 aa13.15□□□□□ -0.31
TRIM27-201ENST00000377194 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.31
TRIM27-201ENST00000377194 FHL3Q13643 280 aa13.15□□□□□ -0.31
TRIM27-201ENST00000377194 PRR25Q96S07 402 aa13.15□□□□□ -0.31
TRIM27-201ENST00000377194 MAP1LC3AQ9H492 121 aa13.15□□□□□ -0.31
TRIM27-201ENST00000377194 DOPEY1Q5JWR5 2465 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 ACACBO00763 2458 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 DPM2O94777 84 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 RRN3P1Q2M238 152 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 TMEM158Q8WZ71 300 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 CDIP1Q9H305 208 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 MRPL35Q9NZE8 188 aaKnown RBP13.14□□□□□ -0.31
TRIM27-201ENST00000377194 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 RNF185Q96GF1 192 aa13.14□□□□□ -0.31
TRIM27-201ENST00000377194 IGHV3-49A0A0A0MS15 119 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 PRAC2D3DTV9 90 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 ZNF575Q86XF7 245 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 RNF183Q96D59 192 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.12□□□□□ -0.312e-8■■■■■ 30.9
TRIM27-201ENST00000377194 FOXI1Q12951 378 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 NFE4Q86UQ8 179 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 PTH2Q96A98 100 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 SS18L2Q9UHA2 77 aa13.12□□□□□ -0.31
TRIM27-201ENST00000377194 IGLC6P0CF74 106 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 COX8CQ7Z4L0 72 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 TNFRSF6BO95407 300 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 IGHV1-69P01742 117 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 XGP55808 180 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 ERCC8Q13216 396 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 ZNF418Q8TF45 676 aaPredicted RBP13.11□□□□□ -0.31
TRIM27-201ENST00000377194 MYO18BQ8IUG5 2567 aa13.11□□□□□ -0.31
TRIM27-201ENST00000377194 IGHV4-38-2P0DP08 117 aa13.1□□□□□ -0.31
TRIM27-201ENST00000377194 SMCPP49901 116 aaPredicted RBP13.1□□□□□ -0.31
TRIM27-201ENST00000377194 CCL19Q99731 98 aa13.1□□□□□ -0.31
TRIM27-201ENST00000377194 C10orf105Q8TEF2 133 aa13.1□□□□□ -0.31
TRIM27-201ENST00000377194 ORM1P02763 201 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 CSPG4Q6UVK1 2322 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 PIMREGQ9BSJ6 248 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 C1QTNF4Q9BXJ3 329 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 CYSLTR1Q9Y271 337 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 MOB4Q9Y3A3 225 aa13.09□□□□□ -0.31
TRIM27-201ENST00000377194 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.31
TRIM27-201ENST00000377194 LINC01546A6NGU7 62 aa13.08□□□□□ -0.31
TRIM27-201ENST00000377194 PGPEP1Q9NXJ5 209 aa13.08□□□□□ -0.31
TRIM27-201ENST00000377194 ZFYVE26Q68DK2 2539 aa13.08□□□□□ -0.32
TRIM27-201ENST00000377194 TRAV41A0A0B4J266 112 aa13.08□□□□□ -0.32
TRIM27-201ENST00000377194 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
TRIM27-201ENST00000377194 PSMG4Q5JS54 123 aa13.08□□□□□ -0.32
TRIM27-201ENST00000377194 MORN3Q6PF18 240 aaPredicted RBP13.08□□□□□ -0.32
TRIM27-201ENST00000377194 NXT2Q9NPJ8 142 aaKnown RBP13.08□□□□□ -0.32
TRIM27-201ENST00000377194 TRBV7-1A0A0A6YYK4 115 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms