RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 ZNF705GA8MUZ8 300 aaPredicted RBP12.34□□□□□ -0.43
HLA-F-218ENST00000376861 RNASE4P34096 147 aaKnown RBP12.34□□□□□ -0.43
HLA-F-218ENST00000376861 PRR9Q5T870 116 aa12.34□□□□□ -0.43
HLA-F-218ENST00000376861 C7orf71A4D174 169 aa12.33□□□□□ -0.44
HLA-F-218ENST00000376861 BTN1A1Q13410 526 aa12.33□□□□□ -0.44
HLA-F-218ENST00000376861 Q6AWC8 147 aa12.33□□□□□ -0.44
HLA-F-218ENST00000376861 LINC01587Q99440 93 aa12.33□□□□□ -0.44
HLA-F-218ENST00000376861 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
HLA-F-218ENST00000376861 V9GYV3 84 aa12.33□□□□□ -0.44
HLA-F-218ENST00000376861 CT83Q5H943 113 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 GFI1BQ5VTD9 330 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 TMEM256Q8N2U0 113 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 CSNK1G2-AS1Q8NCQ2 148 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 C20orf144Q9BQM9 153 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 HTN1P15515 57 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
HLA-F-218ENST00000376861 XKRY2A2RUG3 117 aa12.31□□□□□ -0.44
HLA-F-218ENST00000376861 TMEM189A5PLL7 270 aa12.31□□□□□ -0.44
HLA-F-218ENST00000376861 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
HLA-F-218ENST00000376861 CRXO43186 299 aaPredicted RBP12.31□□□□□ -0.44
HLA-F-218ENST00000376861 ORM1P02763 201 aa12.31□□□□□ -0.44
HLA-F-218ENST00000376861 MIFP14174 115 aa12.31□□□□□ -0.44
HLA-F-218ENST00000376861 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
HLA-F-218ENST00000376861 KIR3DS1Q14943 382 aa12.31□□□□□ -0.44
HLA-F-218ENST00000376861 SMIM9A6NGZ8 99 aa12.3□□□□□ -0.44
HLA-F-218ENST00000376861 A8MWL6 223 aa12.3□□□□□ -0.44
HLA-F-218ENST00000376861 SCO1O75880 301 aa12.3□□□□□ -0.44
HLA-F-218ENST00000376861 RRN3P1Q2M238 152 aa12.3□□□□□ -0.44
HLA-F-218ENST00000376861 LINC01559Q495D7 138 aa12.3□□□□□ -0.44
HLA-F-218ENST00000376861 IMMP2LQ96T52 175 aa12.3□□□□□ -0.44
HLA-F-218ENST00000376861 IL36BQ9NZH7 164 aa12.3□□□□□ -0.44
HLA-F-218ENST00000376861 S100PP25815 95 aa12.29□□□□□ -0.44
HLA-F-218ENST00000376861 ZNF705AQ6ZN79 300 aaPredicted RBP12.29□□□□□ -0.44
HLA-F-218ENST00000376861 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
HLA-F-218ENST00000376861 RPL19P84098 196 aaKnown RBP12.28□□□□□ -0.44
HLA-F-218ENST00000376861 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
HLA-F-218ENST00000376861 KCNIP4Q6PIL6 250 aa12.28□□□□□ -0.44
HLA-F-218ENST00000376861 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
HLA-F-218ENST00000376861 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
HLA-F-218ENST00000376861 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
HLA-F-218ENST00000376861 NAGKQ9UJ70 344 aa12.28□□□□□ -0.44
HLA-F-218ENST00000376861 FAM159AQ6UWV7 190 aa12.27□□□□□ -0.44
HLA-F-218ENST00000376861 KCNS1Q96KK3 526 aa12.27□□□□□ -0.44
HLA-F-218ENST00000376861 NEU1Q99519 415 aa12.27□□□□□ -0.44
HLA-F-218ENST00000376861 C11orf21Q9P2W6 132 aa12.27□□□□□ -0.44
HLA-F-218ENST00000376861 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
HLA-F-218ENST00000376861 A0A0J9YWU9 116 aa12.27□□□□□ -0.45
HLA-F-218ENST00000376861 FAM231BA6NCW3 169 aa12.27□□□□□ -0.45
HLA-F-218ENST00000376861 Q6ZQT7 251 aa12.27□□□□□ -0.45
HLA-F-218ENST00000376861 PYGO2Q9BRQ0 406 aa12.27□□□□□ -0.45
HLA-F-218ENST00000376861 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
HLA-F-218ENST00000376861 X6R8D5 127 aa12.27□□□□□ -0.45
HLA-F-218ENST00000376861 IGKV3D-20A0A0C4DH25 116 aa12.26□□□□□ -0.45
HLA-F-218ENST00000376861 IGHV4-28A0A0C4DH34 117 aa12.26□□□□□ -0.45
HLA-F-218ENST00000376861 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
HLA-F-218ENST00000376861 DEFB4AO15263 64 aa12.26□□□□□ -0.45
HLA-F-218ENST00000376861 CXCL1P09341 107 aa12.26□□□□□ -0.45
HLA-F-218ENST00000376861 EMP1P54849 157 aa12.26□□□□□ -0.45
HLA-F-218ENST00000376861 NBEAL2Q6ZNJ1 2754 aa12.25□□□□□ -0.45
HLA-F-218ENST00000376861 ANXA2RQ3ZCQ2 193 aa12.25□□□□□ -0.45
HLA-F-218ENST00000376861 MUC21Q5SSG8 566 aa12.25□□□□□ -0.45
HLA-F-218ENST00000376861 NAT8BQ9UHF3 227 aa12.25□□□□□ -0.45
HLA-F-218ENST00000376861 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
HLA-F-218ENST00000376861 PRKDCP78527 4128 aaKnown RBP12.24□□□□□ -0.45
HLA-F-218ENST00000376861 TRAV9-1A0A075B6T8 112 aa12.24□□□□□ -0.45
HLA-F-218ENST00000376861 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
HLA-F-218ENST00000376861 CBY3A6NI87 242 aa12.24□□□□□ -0.45
HLA-F-218ENST00000376861 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
HLA-F-218ENST00000376861 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
HLA-F-218ENST00000376861 GZMBP10144 247 aa12.24□□□□□ -0.45
HLA-F-218ENST00000376861 TCL1AP56279 114 aa12.24□□□□□ -0.45
HLA-F-218ENST00000376861 RBMY1FQ15415 496 aaKnown RBP12.24□□□□□ -0.45
HLA-F-218ENST00000376861 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
HLA-F-218ENST00000376861 A0A1W2PPQ1 181 aa12.23□□□□□ -0.45
HLA-F-218ENST00000376861 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
HLA-F-218ENST00000376861 Q8NAQ8 132 aa12.23□□□□□ -0.45
HLA-F-218ENST00000376861 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
HLA-F-218ENST00000376861 BTF3L4Q96K17 158 aa12.23□□□□□ -0.45
HLA-F-218ENST00000376861 WWC2-AS2Q96NR7 200 aa12.23□□□□□ -0.45
HLA-F-218ENST00000376861 C11orf68Q9H3H3 251 aaKnown RBP12.23□□□□□ -0.45
HLA-F-218ENST00000376861 COL7A1Q02388 2944 aa12.23□□□□□ -0.45
HLA-F-218ENST00000376861 GRIFINA4D1Z8 144 aa12.22□□□□□ -0.45
HLA-F-218ENST00000376861 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
HLA-F-218ENST00000376861 FAM3BP58499 235 aaPredicted RBP12.22□□□□□ -0.45
HLA-F-218ENST00000376861 ELOBQ15370 118 aa12.22□□□□□ -0.45
HLA-F-218ENST00000376861 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
HLA-F-218ENST00000376861 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
HLA-F-218ENST00000376861 S100A4P26447 101 aaKnown RBP12.21□□□□□ -0.45
HLA-F-218ENST00000376861 ASIPP42127 132 aa12.21□□□□□ -0.45
HLA-F-218ENST00000376861 ZNF493Q6ZR52 646 aa12.21□□□□□ -0.45
HLA-F-218ENST00000376861 FER1L6-AS1Q8NA97 138 aa12.21□□□□□ -0.45
HLA-F-218ENST00000376861 TRGV11A0A075B6L2 103 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 SNURFLB1AK76 121 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 PRM2P04554 102 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 TYMSP04818 313 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 DNLZQ5SXM8 178 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 ZNF575Q86XF7 245 aa12.21□□□□□ -0.46
HLA-F-218ENST00000376861 NUP35Q8NFH5 326 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms