RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 PPIFP30405 207 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 TAL2Q16559 108 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 C8orf86Q6ZUL3 223 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 MAPKAPK5-AS1Q8N8E1 139 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 CYSLTR1Q9Y271 337 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 LYPD1Q8N2G4 141 aa11.67□□□□□ -0.54
CCHCR1-201ENST00000376266 SYT8Q8NBV8 401 aa11.67□□□□□ -0.54
CCHCR1-201ENST00000376266 LY6G5BQ8NDX9 201 aa11.67□□□□□ -0.54
CCHCR1-201ENST00000376266 ZNF418Q8TF45 676 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-201ENST00000376266 TRAV40A0A0B4J280 105 aa11.67□□□□□ -0.54
CCHCR1-201ENST00000376266 ACANP16112 2415 aa11.67□□□□□ -0.54
CCHCR1-201ENST00000376266 ATP5LO75964 103 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 FOXI1Q12951 378 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 ONECUT1Q9UBC0 465 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 B4DSR2 109 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 MSMBP08118 114 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 DLX1P56177 255 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 TMEM190Q8WZ59 177 aa11.66□□□□□ -0.54
CCHCR1-201ENST00000376266 CSPG4Q6UVK1 2322 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 HLA-DRB4P13762 266 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 DLX6P56179 175 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 PRB3Q04118 309 aaPredicted RBP11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 TMEM158Q8WZ71 300 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 NXT2Q9NPJ8 142 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 HLA-DRB4X5D2U9 266 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.541e-7■■■■■ 32.9
CCHCR1-201ENST00000376266 GAS8-AS1O95177 125 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 IGHV4-31P0DP07 118 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 LINC01356Q8N9X3 169 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 AAMDCQ9H7C9 122 aa11.65□□□□□ -0.54
CCHCR1-201ENST00000376266 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 MRPL35Q9NZE8 188 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 MSRB1Q9NZV6 116 aa11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 TGFAP01135 160 aa11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 EGR2P11161 476 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 HIF1ANQ9NWT6 349 aa11.64□□□□□ -0.55
CCHCR1-201ENST00000376266 LINC01546A6NGU7 62 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 H3BRN7 92 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 MT-ATP8P03928 68 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 CNTFRP26992 372 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 KLRD1Q13241 179 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 PLGLAQ15195 96 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 LINC01559Q495D7 138 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 RNF185Q96GF1 192 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 IGKV1-17P01599 117 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 TLN2Q9Y4G6 2542 aa11.63□□□□□ -0.55
CCHCR1-201ENST00000376266 NCBP2LA6PVI3 153 aaKnown RBP11.62□□□□□ -0.55
CCHCR1-201ENST00000376266 IGHV1-8P0DP01 117 aa11.62□□□□□ -0.55
CCHCR1-201ENST00000376266 RPEQ96AT9 228 aa11.62□□□□□ -0.55
CCHCR1-201ENST00000376266 HOXA3O43365 443 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 IGKV2-40A0A087WW87 121 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 I3L2K1 104 aa11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 IGKV2D-40P01614 121 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 GATA1P15976 413 aaPredicted RBP11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 LINC00311Q8N616 119 aa11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 ATP6V0E2Q8NHE4 81 aa11.61□□□□□ -0.55
CCHCR1-201ENST00000376266 TRBV7-3A0A075B6L6 115 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 M0R1W7 72 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 NDUFA3O95167 84 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 IL4P05112 153 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 Q6ZUT4 128 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 RNF183Q96D59 192 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 SIRPDQ9H106 197 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 SIGLEC9Q9Y336 463 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 TSPAN13O95857 204 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 ORM1P02763 201 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 IGLC6P0CF74 106 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 CFAP126Q5VTH2 177 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 VMO1Q7Z5L0 202 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 GLMPQ8WWB7 406 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 RNF125Q96EQ8 232 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 PRR25Q96S07 402 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
CCHCR1-201ENST00000376266 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 NFE4Q86UQ8 179 aa11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 XGP55808 180 aa11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 MORN3Q6PF18 240 aaPredicted RBP11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 Q8N8P6 123 aa11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 DLX4Q92988 240 aaPredicted RBP11.59□□□□□ -0.55
CCHCR1-201ENST00000376266 OR11H12B2RN74 326 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 GATA3P23771 443 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 PRTN3P24158 256 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 COX7A1P24310 79 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 C5orf64Q2M2E5 130 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 OR11H1Q8NG94 326 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 OR11H2Q8NH07 326 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 Q8TAT8 98 aa11.58□□□□□ -0.55
CCHCR1-201ENST00000376266 ERG28Q9UKR5 140 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms