RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 TMEM189A5PLL7 270 aa16.67■□□□□ 0.26
HLA-C-202ENST00000376237 RHEBQ15382 184 aa16.67■□□□□ 0.26
HLA-C-202ENST00000376237 ZNF705AQ6ZN79 300 aaPredicted RBP16.67■□□□□ 0.26
HLA-C-202ENST00000376237 C11orf21Q9P2W6 132 aa16.67■□□□□ 0.26
HLA-C-202ENST00000376237 XKRY2A2RUG3 117 aa16.66■□□□□ 0.26
HLA-C-202ENST00000376237 ZNF705GA8MUZ8 300 aaPredicted RBP16.66■□□□□ 0.26
HLA-C-202ENST00000376237 RPS20P60866 119 aaKnown RBP16.66■□□□□ 0.26
HLA-C-202ENST00000376237 ANXA2RQ3ZCQ2 193 aa16.66■□□□□ 0.26
HLA-C-202ENST00000376237 CT83Q5H943 113 aa16.66■□□□□ 0.26
HLA-C-202ENST00000376237 OR2D3Q8NGH3 330 aa16.66■□□□□ 0.26
HLA-C-202ENST00000376237 RPP21Q9H633 154 aaKnown RBP16.66■□□□□ 0.26
HLA-C-202ENST00000376237 NAGKQ9UJ70 344 aa16.66■□□□□ 0.26
HLA-C-202ENST00000376237 IGKV3D-20A0A0C4DH25 116 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 RNF212Q495C1 297 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 MUC21Q5SSG8 566 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 MRAPQ8TCY5 172 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 RCHY1Q96PM5 261 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 TP53TG1Q9Y2A0 90 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 DNAH3Q8TD57 4116 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 IGHV3OR16-12A0A075B7B8 117 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 DEFB135Q30KP9 77 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 RNF183Q96D59 192 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 CTDSP1Q9GZU7 261 aa16.65■□□□□ 0.26
HLA-C-202ENST00000376237 C7orf77A4D0Y5 90 aa16.64■□□□□ 0.25
HLA-C-202ENST00000376237 CXCL1P09341 107 aa16.64■□□□□ 0.25
HLA-C-202ENST00000376237 V9GYV3 84 aa16.64■□□□□ 0.25
HLA-C-202ENST00000376237 A0A087WWC5 75 aa16.63■□□□□ 0.25
HLA-C-202ENST00000376237 A8MWL6 223 aa16.63■□□□□ 0.25
HLA-C-202ENST00000376237 NEU1Q99519 415 aa16.63■□□□□ 0.25
HLA-C-202ENST00000376237 TRGV11A0A075B6L2 103 aa16.62■□□□□ 0.25
HLA-C-202ENST00000376237 SMIM9A6NGZ8 99 aa16.62■□□□□ 0.25
HLA-C-202ENST00000376237 CBY3A6NI87 242 aa16.62■□□□□ 0.25
HLA-C-202ENST00000376237 RPL19P84098 196 aaKnown RBP16.62■□□□□ 0.25
HLA-C-202ENST00000376237 TMEM242Q9NWH2 141 aa16.62■□□□□ 0.25
HLA-C-202ENST00000376237 SPRY2O43597 315 aa16.61■□□□□ 0.25
HLA-C-202ENST00000376237 HTN1P15515 57 aa16.61■□□□□ 0.25
HLA-C-202ENST00000376237 RPS10P5Q9NQ39 176 aa16.61■□□□□ 0.25
HLA-C-202ENST00000376237 TMSB15BA0A087X1C1 80 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 DEFA6Q01524 100 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 RRN3P1Q2M238 152 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 DNLZQ5SXM8 178 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 SBSPONQ8IVN8 264 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 FAM231BA6NCW3 169 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 GNRH2O43555 120 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 TYMSP04818 313 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 ZNF575Q86XF7 245 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 TSKUQ8WUA8 353 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 GFRA4Q9GZZ7 299 aa16.6■□□□□ 0.25
HLA-C-202ENST00000376237 ASIPP42127 132 aa16.59■□□□□ 0.25
HLA-C-202ENST00000376237 ZNF493Q6ZR52 646 aa16.59■□□□□ 0.25
HLA-C-202ENST00000376237 S100A4P26447 101 aaKnown RBP16.58■□□□□ 0.24
HLA-C-202ENST00000376237 OR11H2Q8NH07 326 aa16.58■□□□□ 0.24
HLA-C-202ENST00000376237 TMEM263Q8WUH6 116 aaKnown RBP16.58■□□□□ 0.24
HLA-C-202ENST00000376237 TP53TG3Q9ULZ0 132 aa16.58■□□□□ 0.24
HLA-C-202ENST00000376237 X6R8D5 127 aa16.58■□□□□ 0.24
HLA-C-202ENST00000376237 A0A1W2PPQ1 181 aa16.57■□□□□ 0.24
HLA-C-202ENST00000376237 GRIFINA4D1Z8 144 aa16.57■□□□□ 0.24
HLA-C-202ENST00000376237 OVOL2Q9BRP0 275 aa16.57■□□□□ 0.24
HLA-C-202ENST00000376237 IL36BQ9NZH7 164 aa16.57■□□□□ 0.24
HLA-C-202ENST00000376237 IGHV3-16A0A0C4DH30 117 aa16.56■□□□□ 0.24
HLA-C-202ENST00000376237 MED14OSP0DP75 135 aa16.56■□□□□ 0.24
HLA-C-202ENST00000376237 FOXA3P55318 350 aaPredicted RBP16.56■□□□□ 0.24
HLA-C-202ENST00000376237 C16orf74Q96GX8 76 aa16.56■□□□□ 0.24
HLA-C-202ENST00000376237 SPATA25Q9BR10 227 aa16.56■□□□□ 0.24
HLA-C-202ENST00000376237 MIFP14174 115 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 AZU1P20160 251 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 ZNF415Q09FC8 603 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 RNASE8Q8TDE3 154 aaKnown RBP16.55■□□□□ 0.24
HLA-C-202ENST00000376237 IMMP2LQ96T52 175 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 B9D2Q9BPU9 175 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 TM2D3Q9BRN9 247 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 SMIM27A0A1W2PRY6 76 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 GZMBP10144 247 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 ATRAIDQ6UW56 229 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 FER1L6-AS1Q8NA97 138 aa16.55■□□□□ 0.24
HLA-C-202ENST00000376237 F2Z2F3 143 aa16.54■□□□□ 0.24
HLA-C-202ENST00000376237 PRM2P04554 102 aa16.54■□□□□ 0.24
HLA-C-202ENST00000376237 IGLC6P0CF74 106 aa16.54■□□□□ 0.24
HLA-C-202ENST00000376237 RNASE3P12724 160 aaKnown RBP16.54■□□□□ 0.24
HLA-C-202ENST00000376237 SSBP4Q9BWG4 385 aaPredicted RBP16.54■□□□□ 0.24
HLA-C-202ENST00000376237 MDFICQ9P1T7 246 aa16.54■□□□□ 0.24
HLA-C-202ENST00000376237 NAT8BQ9UHF3 227 aa16.54■□□□□ 0.24
HLA-C-202ENST00000376237 CXorf65A6NEN9 183 aa16.53■□□□□ 0.24
HLA-C-202ENST00000376237 OR5AL1P0C617 328 aa16.53■□□□□ 0.24
HLA-C-202ENST00000376237 ARMS2P0C7Q2 107 aa16.53■□□□□ 0.24
HLA-C-202ENST00000376237 C11orf72Q8NBR9 251 aa16.53■□□□□ 0.24
HLA-C-202ENST00000376237 GTSF1Q8WW33 167 aa16.53■□□□□ 0.24
HLA-C-202ENST00000376237 HIGD1CA8MV81 97 aa16.52■□□□□ 0.24
HLA-C-202ENST00000376237 SNAI2O43623 268 aa16.52■□□□□ 0.24
HLA-C-202ENST00000376237 TCL1AP56279 114 aa16.52■□□□□ 0.24
HLA-C-202ENST00000376237 C9orf85Q96MD7 179 aa16.52■□□□□ 0.24
HLA-C-202ENST00000376237 SPXQ9BT56 116 aa16.52■□□□□ 0.24
HLA-C-202ENST00000376237 ZMAT4Q9H898 229 aa16.52■□□□□ 0.24
HLA-C-202ENST00000376237 SNURFLB1AK76 121 aa16.51■□□□□ 0.23
HLA-C-202ENST00000376237 H3BVH4 76 aa16.51■□□□□ 0.23
HLA-C-202ENST00000376237 KCNIP4Q6PIL6 250 aa16.51■□□□□ 0.23
HLA-C-202ENST00000376237 SCRT2Q9NQ03 307 aa16.51■□□□□ 0.23
HLA-C-202ENST00000376237 GSN-AS1Q9NRJ2 163 aa16.51■□□□□ 0.23
HLA-C-202ENST00000376237 S100PP25815 95 aa16.5■□□□□ 0.23
HLA-C-202ENST00000376237 TPPP3Q9BW30 176 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms