RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 RPL39LQ96EH5 51 aaKnown RBP10.81□□□□□ -0.68
COL4A1-201ENST00000375820 TICRRQ7Z2Z1 1910 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 WDR90Q96KV7 1748 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 Q8TCH9 128 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 C15orf65H3BRN8 121 aa10.8□□□□□ -0.68
COL4A1-201ENST00000375820 CCL24O00175 119 aa10.8□□□□□ -0.68
COL4A1-201ENST00000375820 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
COL4A1-201ENST00000375820 TRAV4A0A0B4J268 109 aa10.8□□□□□ -0.68
COL4A1-201ENST00000375820 LMO1P25800 156 aa10.8□□□□□ -0.68
COL4A1-201ENST00000375820 DAND5Q8N907 189 aa10.8□□□□□ -0.68
COL4A1-201ENST00000375820 WNK2Q9Y3S1 2297 aa10.8□□□□□ -0.68
COL4A1-201ENST00000375820 HELZP42694 1942 aaKnown RBP10.8□□□□□ -0.68
COL4A1-201ENST00000375820 F8VRH5 84 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 IGLC1P0CG04 106 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 ANKRD29Q8N6D5 301 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 UTF1Q5T230 341 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 NCR3O14931 201 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 PCP2Q8IVA1 136 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 MYLKQ15746 1914 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 RITA1Q96K30 269 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 SBF1O95248 1867 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 CCL25O15444 150 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 LGALS9BQ3B8N2 356 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 LGALS9CQ6DKI2 356 aa10.79□□□□□ -0.68
COL4A1-201ENST00000375820 PKDREJQ9NTG1 2253 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 F8W1H4 67 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 K7EM74 188 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 NPBQ8NG41 125 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 IGHV4-38-2P0DP08 117 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 C12orf74Q32Q52 190 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 CT83Q5H943 113 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 WFDC11Q8NEX6 87 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 C20orf144Q9BQM9 153 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 GYPEP15421 78 aa10.78□□□□□ -0.68
COL4A1-201ENST00000375820 GTF3C1Q12789 2109 aa10.77□□□□□ -0.68
COL4A1-201ENST00000375820 RHOHQ15669 191 aa10.77□□□□□ -0.68
COL4A1-201ENST00000375820 LY6G6EA0A0G2JKS1 128 aa10.77□□□□□ -0.68
COL4A1-201ENST00000375820 PIFOQ8TCI5 191 aa10.77□□□□□ -0.68
COL4A1-201ENST00000375820 U3KQA8 63 aa10.77□□□□□ -0.68
COL4A1-201ENST00000375820 ZNF491Q8N8L2 437 aa10.77□□□□□ -0.69
COL4A1-201ENST00000375820 GAGE12HA6NDE8 117 aa10.77□□□□□ -0.69
COL4A1-201ENST00000375820 FAM215AQ9Y5M1 114 aa10.77□□□□□ -0.69
COL4A1-201ENST00000375820 COX7B2Q8TF08 81 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 TMEM14CQ9P0S9 112 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 CHKB-CPT1BH3BT56 60 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 CDPF1Q6NVV7 123 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 ETDCA0A1B0GVM5 59 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 HEATR5AQ86XA9 2040 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 TIRAPP58753 221 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 C1orf43Q9BWL3 253 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 AGPAT4-IT1Q9H0P7 198 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 LTBP1Q14766 1721 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 CAMK2N2Q96S95 79 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 SS18L2Q9UHA2 77 aa10.76□□□□□ -0.69
COL4A1-201ENST00000375820 IGKV3D-7A0A0C4DH55 119 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 CTSZQ9UBR2 303 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 ZNF407Q9C0G0 2248 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 VWA8A3KMH1 1905 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 FOXI2Q6ZQN5 318 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 LTAP01374 205 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
COL4A1-201ENST00000375820 C1orf147Q96MC9 270 aaPredicted RBP10.75□□□□□ -0.69
COL4A1-201ENST00000375820 F8W735 103 aaPredicted RBP10.74□□□□□ -0.69
COL4A1-201ENST00000375820 WFDC9Q8NEX5 89 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 PRSS33Q8NF86 280 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 VPREB3Q9UKI3 123 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 WDR81Q562E7 1941 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 DEFB1P60022 68 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 SLC25A29Q8N8R3 303 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 BAALCQ8WXS3 180 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL4A1-201ENST00000375820 NACAE9PAV3 2078 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 BLCAPP62952 87 aa10.74□□□□□ -0.69
COL4A1-201ENST00000375820 SH2D6Q7Z4S9 175 aa10.73□□□□□ -0.69
COL4A1-201ENST00000375820 J3QLI3 93 aa10.73□□□□□ -0.69
COL4A1-201ENST00000375820 PLXND1Q9Y4D7 1925 aa10.73□□□□□ -0.69
COL4A1-201ENST00000375820 IGHV2-5P01817 119 aa10.73□□□□□ -0.69
COL4A1-201ENST00000375820 RSPO1Q2MKA7 263 aaPredicted RBP10.73□□□□□ -0.69
COL4A1-201ENST00000375820 HIST2H2BCQ6DN03 193 aa10.73□□□□□ -0.69
COL4A1-201ENST00000375820 MSRB1Q9NZV6 116 aa10.73□□□□□ -0.69
COL4A1-201ENST00000375820 GP9P14770 177 aa10.73□□□□□ -0.69
COL4A1-201ENST00000375820 IGHV4-30-2A0A087WSY4 118 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 LINC00173Q6ZV60 143 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 RBAKDNA6NC62 111 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 PROP1O75360 226 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 CFC1BP0CG36 223 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 CFC1P0CG37 223 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 ACACAQ13085 2346 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 TEX48A0A1B0GUV7 120 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 IGHG2P01859 326 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 C14orf132Q9NPU4 83 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 ELANEP08246 267 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 ZFP2Q6ZN57 461 aa10.72□□□□□ -0.69
COL4A1-201ENST00000375820 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.69
COL4A1-201ENST00000375820 IGLC7A0M8Q6 106 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms