RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 GFRA4Q9GZZ7 299 aa11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 FAM215AQ9Y5M1 114 aa11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 GATA1P15976 413 aaPredicted RBP11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 DYNAPQ8N1N2 210 aa11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 YPEL3P61236 119 aaPredicted RBP11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 UBE2AP49459 152 aa11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 TSC2P49815 1807 aa11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 RLFQ13129 1914 aa11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 PROP1O75360 226 aa11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 TMEM141Q96I45 108 aa11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 LY96Q9Y6Y9 160 aa11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 FOXL2NBQ6ZUU3 175 aa11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 RHODO00212 210 aa11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 WT1P19544 449 aaPredicted RBP11.61□□□□□ -0.55
NOTCH4-201ENST00000375023 IGHG4P01861 327 aa11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 LINC01559Q495D7 138 aa11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 PCNX1Q96RV3 2341 aa11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 BUB3O43684 328 aa11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 WIPF2Q8TF74 440 aaPredicted RBP11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 KIAA1671Q9BY89 1806 aa11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 VOPP1Q96AW1 172 aa11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 SMAD5-AS1Q9Y6J3 95 aa11.6□□□□□ -0.55
NOTCH4-201ENST00000375023 C15orf65H3BRN8 121 aa11.59□□□□□ -0.55
NOTCH4-201ENST00000375023 AMTNQ6UX39 209 aa11.59□□□□□ -0.55
NOTCH4-201ENST00000375023 Q6ZWC4 215 aa11.59□□□□□ -0.55
NOTCH4-201ENST00000375023 V9GYV3 84 aa11.59□□□□□ -0.55
NOTCH4-201ENST00000375023 THSD7BQ9C0I4 1608 aa11.59□□□□□ -0.55
NOTCH4-201ENST00000375023 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
NOTCH4-201ENST00000375023 Q8TCH9 128 aa11.59□□□□□ -0.55
NOTCH4-201ENST00000375023 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 CARD19Q96LW7 228 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 ZGRF1Q86YA3 2104 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 LYPD6BQ8NI32 183 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 FXYD5Q96DB9 178 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 LYL1P12980 280 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 BLCAPP62952 87 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 CTSZQ9UBR2 303 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 J3QLI3 93 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 NBASA2RRP1 2371 aa11.58□□□□□ -0.56
NOTCH4-201ENST00000375023 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 H3BMG7 143 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 BOD1L2Q8IYS8 172 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 IGHV4-61A0A0C4DH41 118 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 ZNF492Q9P255 531 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 MGAMO43451 1857 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 DEFB1P60022 68 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 SHISA9B4DS77 424 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 Q6ZS49 121 aa11.57□□□□□ -0.56
NOTCH4-201ENST00000375023 CTSGP08311 255 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 ETDBQ3ZM63 59 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 Q6ZVH6 145 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 UBL5Q9BZL1 73 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 FNDC10F2Z333 226 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 PLXNA3P51805 1871 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 EML6Q6ZMW3 1958 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 IGHV2-5P01817 119 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 EGR2P11161 476 aaPredicted RBP11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 CEND1Q8N111 149 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 NPBQ8NG41 125 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 GYPEP15421 78 aa11.56□□□□□ -0.56
NOTCH4-201ENST00000375023 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
NOTCH4-201ENST00000375023 K7EN84 100 aa11.55□□□□□ -0.56
NOTCH4-201ENST00000375023 IGLC1P0CG04 106 aa11.55□□□□□ -0.56
NOTCH4-201ENST00000375023 IGLL1P15814 213 aa11.55□□□□□ -0.56
NOTCH4-201ENST00000375023 Q9H8V8 135 aa11.55□□□□□ -0.56
NOTCH4-201ENST00000375023 DAND5Q8N907 189 aa11.55□□□□□ -0.56
NOTCH4-201ENST00000375023 C5orf47Q569G3 176 aa11.54□□□□□ -0.56
NOTCH4-201ENST00000375023 RSPO1Q2MKA7 263 aaPredicted RBP11.54□□□□□ -0.56
NOTCH4-201ENST00000375023 RIF1Q5UIP0 2472 aaKnown RBP11.54□□□□□ -0.56
NOTCH4-201ENST00000375023 J3QQQ9 107 aa11.54□□□□□ -0.56
NOTCH4-201ENST00000375023 NCR3O14931 201 aa11.54□□□□□ -0.56
NOTCH4-201ENST00000375023 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
NOTCH4-201ENST00000375023 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
NOTCH4-201ENST00000375023 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
NOTCH4-201ENST00000375023 NCKAP5O14513 1909 aa11.53□□□□□ -0.56
NOTCH4-201ENST00000375023 TRACP01848 142 aa11.53□□□□□ -0.56
NOTCH4-201ENST00000375023 Q0VG73 95 aa11.53□□□□□ -0.56
NOTCH4-201ENST00000375023 TRAV4A0A0B4J268 109 aa11.53□□□□□ -0.56
NOTCH4-201ENST00000375023 IGLC2P0DOY2 106 aa11.53□□□□□ -0.56
NOTCH4-201ENST00000375023 IGLC3P0DOY3 106 aa11.53□□□□□ -0.56
NOTCH4-201ENST00000375023 C9orf118A6NHY6 69 aa11.52□□□□□ -0.56
NOTCH4-201ENST00000375023 NPSP0C0P6 89 aa11.52□□□□□ -0.56
NOTCH4-201ENST00000375023 HERVK_113P63121 156 aa11.52□□□□□ -0.56
NOTCH4-201ENST00000375023 CRYBA4P53673 196 aa11.52□□□□□ -0.57
NOTCH4-201ENST00000375023 IGFL3Q6UXB1 125 aa11.52□□□□□ -0.57
NOTCH4-201ENST00000375023 A0A096LNI7 61 aa11.52□□□□□ -0.57
NOTCH4-201ENST00000375023 PRO1854Q9UHT4 67 aa11.52□□□□□ -0.57
NOTCH4-201ENST00000375023 ADAMTS9Q9P2N4 1935 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 A8MWP6 167 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 RHOHQ15669 191 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 AGPAT4-IT1Q9H0P7 198 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 PLXNA4Q9HCM2 1894 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 PLA2G2CQ5R387 149 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 IGLV1-44P01699 117 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
NOTCH4-201ENST00000375023 C1orf147Q96MC9 270 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms