RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ATP6V0E1O15342 81 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 CTSGP08311 255 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 C3orf79P0CE67 100 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 CT45A10P0DMU9 189 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 SAA4P35542 130 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 CTRLP40313 264 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 CSN1S1P47710 185 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 RPS20P60866 119 aaKnown RBP3.64□□□□□ -1.83
USP48-202ENST00000374730 KRTDAPP60985 99 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 PAX8Q06710 450 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 RIGQ13278 110 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 SAPCD1Q5SSQ6 148 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 FAM120AOSQ5T036 256 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 FAM159AQ6UWV7 190 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 LINC00469Q8N7U9 141 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 BORCS7Q96B45 105 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 PGLYRP4Q96LB8 373 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 C17orf77Q96MU5 243 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 MIEN1Q9BRT3 115 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 S4R3C0 116 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 ABCA12Q86UK0 2595 aa3.64□□□□□ -1.83
USP48-202ENST00000374730 MED13LQ71F56 2210 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 DOPEY1Q5JWR5 2465 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.63□□□□□ -1.83
USP48-202ENST00000374730 C20orf202A1L168 122 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 OR2T8A6NH00 312 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 M0QZK8 103 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 M0R143 59 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 M0R2Z0 102 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 NDUFS8O00217 210 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 BRI3O95415 125 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 IGHV4-39P01824 125 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 UQCRFS1P47985 274 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 CRIP1P50238 77 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 RHOGP84095 191 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 PMCHL1Q16048 86 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 ECSCRQ19T08 205 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 C15orf32Q32M92 178 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 RNASEKQ6P5S7 137 aaKnown RBP3.63□□□□□ -1.83
USP48-202ENST00000374730 UNQ5815/PRO19632Q6UWF5 114 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 ZNF493Q6ZR52 646 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 Q71RC1 249 aaPredicted RBP3.63□□□□□ -1.83
USP48-202ENST00000374730 STHQ8IWL8 128 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 C5orf56Q8N8D9 126 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 EEF1AKMT3Q96AZ1 226 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 SLC50A1Q9BRV3 221 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 SNHG12Q9BXW3 62 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 MOB4Q9Y3A3 225 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 SMAD5-AS1Q9Y6J3 95 aa3.63□□□□□ -1.83
USP48-202ENST00000374730 AKAP6Q13023 2319 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 CSMD1Q96PZ7 3565 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 ITPR3Q14573 2671 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 UBR5O95071 2799 aaPredicted RBP3.62□□□□□ -1.83
USP48-202ENST00000374730 TRBV7-1A0A0A6YYK4 115 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 IGHV1-69DA0A0B4J2H0 117 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 IGHV1-24A0A0C4DH33 117 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 A0A1B0GV90 55 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 TMEM189A5PLL7 270 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 RBAKDNA6NC62 111 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 C2orf70A6NJV1 201 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 FAM223BA6NKX1 122 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 CRXO43186 299 aaPredicted RBP3.62□□□□□ -1.83
USP48-202ENST00000374730 SH2D1AO60880 128 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 IGHV1-69P01742 117 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 IGHG4P01861 327 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 OR5AL1P0C617 328 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 ARMS2P0C7Q2 107 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 RNF224P0DH78 156 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 NTF3P20783 257 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 GPR183P32249 361 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 BMI1P35226 326 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 NUTF2P61970 127 aaKnown RBP3.62□□□□□ -1.83
USP48-202ENST00000374730 TDRG1Q3Y452 100 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 SPATA45Q537H7 98 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 EBLN2Q6P2I7 272 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 IL17RELQ6ZVW7 336 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 FAM223AQ8IWN6 122 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 FAM19A2Q8N3H0 131 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 KLHDC1Q8N7A1 406 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 C10orf105Q8TEF2 133 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 MRPL53Q96EL3 112 aaKnown RBP3.62□□□□□ -1.83
USP48-202ENST00000374730 CLEC5AQ9NY25 188 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 UQCR10Q9UDW1 63 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 FLNCQ14315 2725 aa3.62□□□□□ -1.83
USP48-202ENST00000374730 ZFHX3Q15911 3703 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.61□□□□□ -1.836e-7■■■■□ 25.3
USP48-202ENST00000374730 CELSR2Q9HCU4 2923 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 TRAV9-2A0A087WT02 112 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 IGKV2-40A0A087WW87 121 aaPredicted RBP3.61□□□□□ -1.83
USP48-202ENST00000374730 TRAV41A0A0B4J266 112 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 IGHV4-61A0A0C4DH41 118 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 CLPSL1A2RUU4 121 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 H3BUA1 57 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 IGKV2D-40P01614 121 aaPredicted RBP3.61□□□□□ -1.83
USP48-202ENST00000374730 IGF1P05019 195 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 PRSS1P07477 247 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 LINC00614P0C842 121 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 IGLC6P0CF74 106 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 303.7 ms