RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 H3BUX3 64 aa12.99□□□□□ -0.33
PHF1-202ENST00000374516 PRSS1P07477 247 aa12.99□□□□□ -0.33
PHF1-202ENST00000374516 TENM4Q6N022 2769 aa12.98□□□□□ -0.33
PHF1-202ENST00000374516 DSCR9P59020 149 aa12.98□□□□□ -0.33
PHF1-202ENST00000374516 ZNF502Q8TBZ5 544 aa12.98□□□□□ -0.33
PHF1-202ENST00000374516 ORM1P02763 201 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 RPL7P18124 248 aaKnown RBP12.97□□□□□ -0.33
PHF1-202ENST00000374516 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
PHF1-202ENST00000374516 CHAC1Q9BUX1 264 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 CNFNQ9BYD5 112 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 TNFRSF6BO95407 300 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 IGKCP01834 107 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 IGHG4P01861 327 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 EVI2AP22794 236 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 CLEC19AQ6UXS0 136 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 PSMG3-AS1Q96PY0 264 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 NXT2Q9NPJ8 142 aaKnown RBP12.97□□□□□ -0.33
PHF1-202ENST00000374516 APCP25054 2843 aa12.97□□□□□ -0.33
PHF1-202ENST00000374516 TRBV25-1A0A075B6N4 114 aa12.96□□□□□ -0.33
PHF1-202ENST00000374516 SRSF2Q01130 221 aaKnown RBP12.96□□□□□ -0.33
PHF1-202ENST00000374516 PHLDA1Q8WV24 401 aaPredicted RBP12.96□□□□□ -0.33
PHF1-202ENST00000374516 TRAV41A0A0B4J266 112 aa12.96□□□□□ -0.34
PHF1-202ENST00000374516 K7ERJ3 54 aa12.96□□□□□ -0.34
PHF1-202ENST00000374516 CCDC140Q96MF4 163 aa12.96□□□□□ -0.34
PHF1-202ENST00000374516 SMAD5-AS1Q9Y6J3 95 aa12.96□□□□□ -0.34
PHF1-202ENST00000374516 MXRA5Q9NR99 2828 aa12.96□□□□□ -0.34
PHF1-202ENST00000374516 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 SLC25A16P16260 332 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 BLCAPP62952 87 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
PHF1-202ENST00000374516 TEX15Q9BXT5 2789 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 GATA1P15976 413 aaPredicted RBP12.94□□□□□ -0.34
PHF1-202ENST00000374516 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 Q6ZS46 218 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 CEND1Q8N111 149 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 TMEM158Q8WZ71 300 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 FOXC2Q99958 501 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 SMPXQ9UHP9 88 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 RNF223E7ERA6 249 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 TGFAP01135 160 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
PHF1-202ENST00000374516 A0A096LNT2 108 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 DPM2O94777 84 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 LINC01356Q8N9X3 169 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 NHP2Q9NX24 153 aaKnown RBP12.93□□□□□ -0.34
PHF1-202ENST00000374516 IGHV3OR16-13A0A075B7E8 117 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 IGHV3-74A0A0B4J1X5 117 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 IGHV3-66A0A0C4DH42 116 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 A6NDX4 124 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 ATP5LO75964 103 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 KLK9Q2XQG4 91 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 EEF1AKMT3Q96AZ1 226 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 KLK9Q9UKQ9 250 aa12.93□□□□□ -0.34
PHF1-202ENST00000374516 ZNF469Q96JG9 3925 aaPredicted RBP12.92□□□□□ -0.34
PHF1-202ENST00000374516 PPIFP30405 207 aaKnown RBP12.92□□□□□ -0.34
PHF1-202ENST00000374516 ATP5G2Q06055 141 aa12.92□□□□□ -0.34
PHF1-202ENST00000374516 Q8N8P6 123 aa12.92□□□□□ -0.34
PHF1-202ENST00000374516 CREBBPQ92793 2442 aa12.92□□□□□ -0.34
PHF1-202ENST00000374516 TRGV3P03979 118 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 ERCC8Q13216 396 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 SAMD13Q5VXD3 122 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 ZFAND3Q9H8U3 227 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 TMEM160Q9NX00 188 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
PHF1-202ENST00000374516 IGLV2-18A0A075B6J9 118 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 E9PLD3 99 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
PHF1-202ENST00000374516 CIDEAO60543 219 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 C19orf54Q5BKX5 351 aa12.91□□□□□ -0.34
PHF1-202ENST00000374516 GATA3P23771 443 aa12.9□□□□□ -0.34
PHF1-202ENST00000374516 MAPKAPK5-AS1Q8N8E1 139 aa12.9□□□□□ -0.34
PHF1-202ENST00000374516 TRBV7-1A0A0A6YYK4 115 aa12.9□□□□□ -0.34
PHF1-202ENST00000374516 K7EMI3 77 aa12.9□□□□□ -0.34
PHF1-202ENST00000374516 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
PHF1-202ENST00000374516 FOXI2Q6ZQN5 318 aa12.9□□□□□ -0.34
PHF1-202ENST00000374516 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
PHF1-202ENST00000374516 DOPEY2Q9Y3R5 2298 aa12.9□□□□□ -0.35
PHF1-202ENST00000374516 IGLL5B9A064 214 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 F8W1H4 67 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 DEFB112Q30KQ8 113 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
PHF1-202ENST00000374516 CLPSL1A2RUU4 121 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 IGHG2P01859 326 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 IGF1P05019 195 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 LCNL1Q6ZST4 164 aa12.89□□□□□ -0.35
PHF1-202ENST00000374516 TLN2Q9Y4G6 2542 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 IGHV4-59P01825 116 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 WFDC2Q14508 124 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 MYOZ3Q8TDC0 251 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 SIGMAR1Q99720 223 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 KLK15Q9H2R5 256 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 IGKV3D-20A0A0C4DH25 116 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 BUB3O43684 328 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 653.3 ms