RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TRGC1P0CF51 173 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 CTRLP40313 264 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 RASL11AQ6T310 242 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 LYZL1Q6UWQ5 148 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 ZNF747Q9BV97 191 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 CRXO43186 299 aaPredicted RBP11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 CD7P09564 240 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 LEPP41159 167 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 PRR31Q5SQ13 230 aa11.57□□□□□ -0.56
NIPAL3-204ENST00000374399 XKRY2A2RUG3 117 aa11.56□□□□□ -0.56
NIPAL3-204ENST00000374399 C7orf71A4D174 169 aa11.56□□□□□ -0.56
NIPAL3-204ENST00000374399 CDKN1BP46527 198 aa11.56□□□□□ -0.56
NIPAL3-204ENST00000374399 ANXA2RQ3ZCQ2 193 aa11.56□□□□□ -0.56
NIPAL3-204ENST00000374399 MRPL18Q9H0U6 180 aaKnown RBP11.56□□□□□ -0.56
NIPAL3-204ENST00000374399 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 LOC105371267A0A1B0GV96 52 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 CAMPP49913 170 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 RBMY1FQ15415 496 aaKnown RBP11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 MUC21Q5SSG8 566 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 FER1L6-AS1Q8NA97 138 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 WFDC9Q8NEX5 89 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 CNFNQ9BYD5 112 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 MUC21A0A0G2JKD1 596 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 MUC21A0A140T8X8 626 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 OR11H12B2RN74 326 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 FXYD7P58549 80 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 HBBP68871 147 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 SLAQ13239 276 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 GATD1Q8NB37 220 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 CLUHP3Q96NS8 147 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 FAM110AQ9BQ89 295 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 TPPP3Q9BW30 176 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 WFDC10AQ9H1F0 79 aa11.55□□□□□ -0.56
NIPAL3-204ENST00000374399 COX19Q49B96 90 aa11.54□□□□□ -0.56
NIPAL3-204ENST00000374399 NAGKQ9UJ70 344 aa11.54□□□□□ -0.56
NIPAL3-204ENST00000374399 GNRH2O43555 120 aa11.53□□□□□ -0.56
NIPAL3-204ENST00000374399 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
NIPAL3-204ENST00000374399 MT-ND6P03923 174 aa11.53□□□□□ -0.56
NIPAL3-204ENST00000374399 TSPOP30536 169 aa11.53□□□□□ -0.56
NIPAL3-204ENST00000374399 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-204ENST00000374399 SNAI2O43623 268 aa11.52□□□□□ -0.56
NIPAL3-204ENST00000374399 INSL3P51460 131 aa11.52□□□□□ -0.56
NIPAL3-204ENST00000374399 RAB4BP61018 213 aa11.52□□□□□ -0.56
NIPAL3-204ENST00000374399 TDRG1Q3Y452 100 aa11.52□□□□□ -0.56
NIPAL3-204ENST00000374399 DNLZQ5SXM8 178 aa11.52□□□□□ -0.56
NIPAL3-204ENST00000374399 C9orf66Q5T8R8 295 aa11.52□□□□□ -0.56
NIPAL3-204ENST00000374399 COL6A5A8TX70 2615 aa11.52□□□□□ -0.57
NIPAL3-204ENST00000374399 MUC4Q99102 2169 aa11.52□□□□□ -0.57
NIPAL3-204ENST00000374399 C5orf52A6NGY3 159 aa11.52□□□□□ -0.57
NIPAL3-204ENST00000374399 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-204ENST00000374399 RIGQ13278 110 aa11.52□□□□□ -0.57
NIPAL3-204ENST00000374399 MSRB1Q9NZV6 116 aa11.52□□□□□ -0.57
NIPAL3-204ENST00000374399 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
NIPAL3-204ENST00000374399 NTF3P20783 257 aa11.51□□□□□ -0.57
NIPAL3-204ENST00000374399 SSTP61278 116 aa11.51□□□□□ -0.57
NIPAL3-204ENST00000374399 KIAA1644Q3SXP7 199 aa11.51□□□□□ -0.57
NIPAL3-204ENST00000374399 OR10AG1Q8NH19 301 aa11.51□□□□□ -0.57
NIPAL3-204ENST00000374399 SCRT2Q9NQ03 307 aa11.51□□□□□ -0.57
NIPAL3-204ENST00000374399 TP53TG3Q9ULZ0 132 aa11.51□□□□□ -0.57
NIPAL3-204ENST00000374399 H3BVH4 76 aa11.5□□□□□ -0.57
NIPAL3-204ENST00000374399 SPRY2O43597 315 aa11.5□□□□□ -0.57
NIPAL3-204ENST00000374399 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
NIPAL3-204ENST00000374399 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
NIPAL3-204ENST00000374399 ZNF493Q6ZR52 646 aa11.5□□□□□ -0.57
NIPAL3-204ENST00000374399 ANK2Q01484 3957 aa11.5□□□□□ -0.57
NIPAL3-204ENST00000374399 F2Z2F3 143 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 APCSP02743 223 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 IGHV4-4A0A075B6R2 117 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 A0A1B0GW15 77 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 WIPF1O43516 503 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 IGLL1P15814 213 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 NDUFA6P56556 154 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 STHQ8IWL8 128 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 C3orf56Q8N813 242 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 PKD1L1Q8TDX9 2849 aa11.49□□□□□ -0.57
NIPAL3-204ENST00000374399 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
NIPAL3-204ENST00000374399 FAM159AQ6UWV7 190 aa11.48□□□□□ -0.57
NIPAL3-204ENST00000374399 IGHV3-16A0A0C4DH30 117 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 MED14OSP0DP75 135 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 ASIPP42127 132 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 TWIST1Q15672 202 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 COA6Q5JTJ3 125 aaKnown RBP11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 Q8N1Y9 231 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
NIPAL3-204ENST00000374399 PRM2P04554 102 aa11.46□□□□□ -0.57
NIPAL3-204ENST00000374399 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
NIPAL3-204ENST00000374399 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
NIPAL3-204ENST00000374399 MDFICQ9P1T7 246 aa11.46□□□□□ -0.57
NIPAL3-204ENST00000374399 LOC102724200A0A096LPH7 203 aaPredicted RBP11.46□□□□□ -0.58
NIPAL3-204ENST00000374399 S100A6P06703 90 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms