RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 TNFRSF6BO95407 300 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 RPL7P18124 248 aaKnown RBP11.58□□□□□ -0.56
UBXN11-204ENST00000374217 RRN3P1Q2M238 152 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 ZC2HC1BQ5TFG8 222 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 VCX2Q9H322 139 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 TGFAP01135 160 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 IGLV1-47P01700 117 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 IL4P05112 153 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 EGR2P11161 476 aaPredicted RBP11.58□□□□□ -0.56
UBXN11-204ENST00000374217 GATA3P23771 443 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 KLRD1Q13241 179 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 WFDC2Q14508 124 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 CCDC144NLQ6NUI1 221 aa11.58□□□□□ -0.56
UBXN11-204ENST00000374217 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
UBXN11-204ENST00000374217 PRRC2AP48634 2157 aaKnown RBP11.57□□□□□ -0.56
UBXN11-204ENST00000374217 ABCA2Q9BZC7 2435 aa11.57□□□□□ -0.56
UBXN11-204ENST00000374217 NCBP2LA6PVI3 153 aaKnown RBP11.57□□□□□ -0.56
UBXN11-204ENST00000374217 M0R3E3 92 aa11.57□□□□□ -0.56
UBXN11-204ENST00000374217 OR11H6Q8NGC7 330 aa11.57□□□□□ -0.56
UBXN11-204ENST00000374217 PRO0461Q9UI25 63 aa11.57□□□□□ -0.56
UBXN11-204ENST00000374217 VPS13CQ709C8 3753 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 PDZD2O15018 2839 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 TRAV12-1A0A0B4J245 112 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 BUB1B-PAK6H3BSN5 160 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 K7ERJ3 54 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 CKS1BP61024 79 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 MYOZ3Q8TDC0 251 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 C18orf15Q96N68 181 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 MRPL16Q9NX20 251 aaKnown RBP11.56□□□□□ -0.56
UBXN11-204ENST00000374217 A0A087WX48 190 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 TMSB15BA0A087X1C1 80 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 FABP5P3A8MUU1 101 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 FXYD7P58549 80 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 RPEQ96AT9 228 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 SELENOKQ9Y6D0 94 aa11.56□□□□□ -0.56
UBXN11-204ENST00000374217 CSMD1Q96PZ7 3565 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 IGLV2-18A0A075B6J9 118 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 SMKR1H3BMG3 65 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.55□□□□□ -0.56
UBXN11-204ENST00000374217 UBE2E1P51965 193 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 TCTAP57738 103 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 GTSCR1Q86UQ5 136 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 TMEM158Q8WZ71 300 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 DPM3Q9P2X0 92 aa11.55□□□□□ -0.56
UBXN11-204ENST00000374217 IGHV3-72A0A0B4J1Y9 119 aa11.54□□□□□ -0.56
UBXN11-204ENST00000374217 RBAKDNA6NC62 111 aa11.54□□□□□ -0.56
UBXN11-204ENST00000374217 CNTFRP26992 372 aa11.54□□□□□ -0.56
UBXN11-204ENST00000374217 RAB9AP51151 201 aa11.54□□□□□ -0.56
UBXN11-204ENST00000374217 ETDBQ3ZM63 59 aa11.54□□□□□ -0.56
UBXN11-204ENST00000374217 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
UBXN11-204ENST00000374217 TRBV7-3A0A075B6L6 115 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 A6NJY4 79 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 H3BMG7 143 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 J3QLI3 93 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 MFAP4P55083 255 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 LAGE3Q14657 143 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 IL17RELQ6ZVW7 336 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 HIST1H4GQ99525 98 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.53□□□□□ -0.562e-6■■■■□ 21.5
UBXN11-204ENST00000374217 ODF3BA8MYP8 253 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 K7EMI3 77 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 APELAP0DMC3 54 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 ASCL2Q99929 193 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 C1QTNF4Q9BXJ3 329 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 FBXL15Q9H469 300 aa11.53□□□□□ -0.56
UBXN11-204ENST00000374217 CENPVL3A0A0U1RRI6 287 aa11.52□□□□□ -0.57
UBXN11-204ENST00000374217 CNIH1O95406 144 aa11.52□□□□□ -0.57
UBXN11-204ENST00000374217 MINOS1Q5TGZ0 78 aa11.52□□□□□ -0.57
UBXN11-204ENST00000374217 ZNF418Q8TF45 676 aaPredicted RBP11.52□□□□□ -0.57
UBXN11-204ENST00000374217 MINOS1-NBL1R4GNA1 71 aa11.52□□□□□ -0.57
UBXN11-204ENST00000374217 CR1P17927 2039 aa11.52□□□□□ -0.57
UBXN11-204ENST00000374217 IGHV3OR16-10A0A075B7F0 116 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 TRAV40A0A0B4J280 105 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 NPFFO15130 113 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 APOMO95445 188 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 WFDC3Q8IUB2 231 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 TMEM160Q9NX00 188 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 MRPL35Q9NZE8 188 aaKnown RBP11.51□□□□□ -0.57
UBXN11-204ENST00000374217 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
UBXN11-204ENST00000374217 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 F8VRH5 84 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 LY6LH3BQJ8 138 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 H7C1H1 209 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
UBXN11-204ENST00000374217 IGHV1-69P01742 117 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 FOXI1Q12951 378 aa11.51□□□□□ -0.57
UBXN11-204ENST00000374217 DLX4Q92988 240 aaPredicted RBP11.51□□□□□ -0.57
UBXN11-204ENST00000374217 MYMXA0A1B0GTQ4 84 aa11.5□□□□□ -0.57
UBXN11-204ENST00000374217 OR11H12B2RN74 326 aa11.5□□□□□ -0.57
UBXN11-204ENST00000374217 HOXA3O43365 443 aaPredicted RBP11.5□□□□□ -0.57
UBXN11-204ENST00000374217 ORM1P02763 201 aa11.5□□□□□ -0.57
UBXN11-204ENST00000374217 SAA4P35542 130 aa11.5□□□□□ -0.57
UBXN11-204ENST00000374217 ZNF80P51504 273 aaPredicted RBP11.5□□□□□ -0.57
UBXN11-204ENST00000374217 SH2D6Q7Z4S9 175 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms