RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 AGPAT4-IT1Q9H0P7 198 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 LINC00574Q9H8X3 128 aa6.08□□□□□ -1.44
HERC4-202ENST00000373700 RAI1Q7Z5J4 1906 aaPredicted RBP6.08□□□□□ -1.44
HERC4-202ENST00000373700 IGLV11-55A0A075B6I3 123 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 TRAV12-2A0A075B6T6 113 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 IGKV3D-20A0A0C4DH25 116 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 GDF5OSQ5U4N7 250 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 GFRA4Q9GZZ7 299 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 TP73-AS1Q9UF72 201 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 TEP1Q99973 2627 aaKnown RBP6.07□□□□□ -1.44
HERC4-202ENST00000373700 KRTAP10-9P60411 292 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 TEX43Q6ZNM6 134 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 DSCR9P59020 149 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 SRSF1Q07955 248 aaKnown RBP eCLIP6.07□□□□□ -1.445e-10■■■■□ 24.7
HERC4-202ENST00000373700 CT83Q5H943 113 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 TTC9CQ8N5M4 171 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 KLHL30-AS1Q8NEE0 82 aa6.07□□□□□ -1.44
HERC4-202ENST00000373700 PEF1Q9UBV8 284 aaKnown RBP6.07□□□□□ -1.44
HERC4-202ENST00000373700 CRYGCP07315 174 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 C9orf139Q6ZV77 190 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 LINC01587Q99440 93 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 KNCNA6PVL3 124 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 J3QR89 54 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 K7ERU9 68 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 DPM2O94777 84 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 PLP1P60201 277 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 C11orf71Q6IPW1 123 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 WIPF2Q8TF74 440 aaPredicted RBP6.06□□□□□ -1.44
HERC4-202ENST00000373700 SMIM12Q96EX1 92 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 SIRPDQ9H106 197 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 OVOL1O14753 267 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 IGKCP01834 107 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 SMIM13P0DJ93 91 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 SPINK13Q1W4C9 94 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 OR2K2Q8NGT1 345 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 RAX2Q96IS3 184 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 TP53TG3Q9ULZ0 132 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 FAM231BA6NCW3 169 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 PF4P02776 101 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 PCP4P48539 62 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 LAGE3Q14657 143 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 ZNF418Q8TF45 676 aaPredicted RBP6.06□□□□□ -1.44
HERC4-202ENST00000373700 DAZ1Q9NQZ3 744 aaKnown RBP6.06□□□□□ -1.44
HERC4-202ENST00000373700 KLK9Q9UKQ9 250 aa6.06□□□□□ -1.44
HERC4-202ENST00000373700 ASH1LQ9NR48 2969 aaKnown RBP6.05□□□□□ -1.44
HERC4-202ENST00000373700 TRBV12-3P01733 135 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 CFHR4Q92496 578 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 SPCS1Q9Y6A9 102 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 ANXA2RQ3ZCQ2 193 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 LURAP1LQ8IV03 231 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 CSTL1Q9H114 145 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 DKK2Q9UBU2 259 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 GNRH2O43555 120 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
HERC4-202ENST00000373700 DEFB113Q30KQ7 82 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 WFDC11Q8NEX6 87 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 NPBQ8NG41 125 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 ORAOV1Q8WV07 137 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 TNFRSF18Q9Y5U5 241 aa6.05□□□□□ -1.44
HERC4-202ENST00000373700 F8P00451 2351 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 PAX1P15863 534 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 SRSF2Q01130 221 aaKnown RBP6.04□□□□□ -1.44
HERC4-202ENST00000373700 C10orf99Q6UWK7 81 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 CYSLTR1Q9Y271 337 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 KLF12Q9Y4X4 402 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 RNF114Q9Y508 228 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 ATRQ13535 2644 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 KIR2DL5BA0A0G2JN68 375 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 KIR2DL5BA0A0G2JPC4 375 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 BUB3O43684 328 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 RIPPLY3P57055 190 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 KIR2DL5AQ8N109 375 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 UBE2E2Q96LR5 201 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 TTTY13Q9BZ97 58 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 CRYBG3Q68DQ2 2970 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 LY6G5BQ8NDX9 201 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 USMG5Q96IX5 58 aa6.04□□□□□ -1.44
HERC4-202ENST00000373700 CHTOPQ9Y3Y2 248 aaKnown RBP6.04□□□□□ -1.44
HERC4-202ENST00000373700 FAM223BA6NKX1 122 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 INS-IGF2F8WCM5 200 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 ZNF80P51504 273 aaPredicted RBP6.03□□□□□ -1.44
HERC4-202ENST00000373700 DEFB131AP59861 70 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 LOXL1Q08397 574 aaPredicted RBP6.03□□□□□ -1.44
HERC4-202ENST00000373700 Q6ZS46 218 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 FAM223AQ8IWN6 122 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 MS4A6AQ9H2W1 248 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 MRPL16Q9NX20 251 aaKnown RBP6.03□□□□□ -1.44
HERC4-202ENST00000373700 NPIPB6E9PJ23 425 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 ZNF876PQ49A33 203 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 UNQ9165/PRO28630Q6UXU0 137 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 ZNF747Q9BV97 191 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 DPH3P1Q9H4G8 78 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 ZNF815PA8K554 130 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 IGHV3-53P01767 116 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 RRN3P1Q2M238 152 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 C5orf56Q8N8D9 126 aa6.03□□□□□ -1.44
HERC4-202ENST00000373700 GEMIN7Q9H840 131 aaKnown RBP6.03□□□□□ -1.44
HERC4-202ENST00000373700 K7EMI3 77 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms