RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 UNQ9165/PRO28630Q6UXU0 137 aa9.69□□□□□ -0.86
CTPS1-202ENST00000372621 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
CTPS1-202ENST00000372621 CHAC1Q9BUX1 264 aa9.69□□□□□ -0.86
CTPS1-202ENST00000372621 TRAV40A0A0B4J280 105 aa9.68□□□□□ -0.86
CTPS1-202ENST00000372621 ARL3P36405 182 aa9.68□□□□□ -0.86
CTPS1-202ENST00000372621 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTPS1-202ENST00000372621 MYOZ3Q8TDC0 251 aa9.68□□□□□ -0.86
CTPS1-202ENST00000372621 A0A087WX48 190 aa9.68□□□□□ -0.86
CTPS1-202ENST00000372621 TRBV12-3P01733 135 aa9.68□□□□□ -0.86
CTPS1-202ENST00000372621 LINC00477Q96M19 166 aa9.68□□□□□ -0.86
CTPS1-202ENST00000372621 TM4SF20Q53R12 229 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 NDUFA4O00483 81 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
CTPS1-202ENST00000372621 SMIM2Q9BVW6 85 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 TM2D2Q9BX73 214 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 TMEM160Q9NX00 188 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 AKAP6Q13023 2319 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 K7ERU9 68 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 BRI3O95415 125 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 SMIM13P0DJ93 91 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
CTPS1-202ENST00000372621 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
CTPS1-202ENST00000372621 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
CTPS1-202ENST00000372621 IGHV1-69P01742 117 aa9.66□□□□□ -0.86
CTPS1-202ENST00000372621 GCSHP23434 173 aa9.66□□□□□ -0.86
CTPS1-202ENST00000372621 C19orf84I3L1E1 186 aa9.66□□□□□ -0.86
CTPS1-202ENST00000372621 IGHV4-39P01824 125 aa9.66□□□□□ -0.86
CTPS1-202ENST00000372621 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 OVOL1O14753 267 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 RASL10AQ92737 203 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 TRAV21A0A0B4J279 112 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 SAP30O75446 220 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 CEND1Q8N111 149 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 OR5A1Q8NGJ0 315 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 VPS25Q9BRG1 176 aa9.65□□□□□ -0.86
CTPS1-202ENST00000372621 RNF223E7ERA6 249 aa9.65□□□□□ -0.87
CTPS1-202ENST00000372621 PLNP26678 52 aa9.65□□□□□ -0.87
CTPS1-202ENST00000372621 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.87
CTPS1-202ENST00000372621 NEGR1Q7Z3B1 354 aa9.65□□□□□ -0.87
CTPS1-202ENST00000372621 SPCS1Q9Y6A9 102 aa9.65□□□□□ -0.87
CTPS1-202ENST00000372621 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
CTPS1-202ENST00000372621 DEFB1P60022 68 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 SAMD5Q5TGI4 173 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 TOMM6Q96B49 74 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 SELENOKQ9Y6D0 94 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 J3KRW8 73 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
CTPS1-202ENST00000372621 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
CTPS1-202ENST00000372621 SPRY2O43597 315 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 SLC25A16P16260 332 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 DPH3P1Q9H4G8 78 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 H3BUA1 57 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 K7EMI3 77 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 M0R381 172 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 IGHG2P01859 326 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 FABP2P12104 132 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 LY6DQ14210 128 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 ORMDL2Q53FV1 153 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 F8VRH5 84 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 H7C1H1 209 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 K7ERJ3 54 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 ASIPP42127 132 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 USMG5Q96IX5 58 aa9.63□□□□□ -0.87
CTPS1-202ENST00000372621 TAL2Q16559 108 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 NEXN-AS1Q8NBZ9 246 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 RPL39LQ96EH5 51 aaKnown RBP9.62□□□□□ -0.87
CTPS1-202ENST00000372621 AGRNO00468 2067 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 TRBV7-9A0A0J9YWB2 115 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 G3V4G9 280 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
CTPS1-202ENST00000372621 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
CTPS1-202ENST00000372621 POM121L12Q8N7R1 296 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 MUC4Q99102 2169 aa9.62□□□□□ -0.87
CTPS1-202ENST00000372621 IGHV4-61A0A0C4DH41 118 aa9.61□□□□□ -0.87
CTPS1-202ENST00000372621 F6UB75 175 aa9.61□□□□□ -0.87
CTPS1-202ENST00000372621 IGHV4-38-2P0DP08 117 aa9.61□□□□□ -0.87
CTPS1-202ENST00000372621 PHLDA3Q9Y5J5 127 aa9.61□□□□□ -0.87
CTPS1-202ENST00000372621 A6NDX4 124 aa9.61□□□□□ -0.87
CTPS1-202ENST00000372621 S100A4P26447 101 aaKnown RBP9.61□□□□□ -0.87
CTPS1-202ENST00000372621 NHP2Q9NX24 153 aaKnown RBP9.61□□□□□ -0.87
CTPS1-202ENST00000372621 ITPR1Q14643 2758 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 GNRH2O43555 120 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 NXPH4O95158 308 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 IGHV3-11P01762 117 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 RNASE4P34096 147 aaKnown RBP9.6□□□□□ -0.87
CTPS1-202ENST00000372621 SCGB3A1Q96QR1 104 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 SPOCK3Q9BQ16 436 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
CTPS1-202ENST00000372621 SPTAN1Q13813 2472 aaKnown RBP9.6□□□□□ -0.87
CTPS1-202ENST00000372621 LINC01619G3V211 115 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 LY6EQ16553 131 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 CSTL1Q9H114 145 aa9.6□□□□□ -0.87
CTPS1-202ENST00000372621 E9PLD3 99 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms