RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PSMB2P49721 201 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 DLX6P56179 175 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 MZT1Q08AG7 82 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 HES1Q14469 280 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 C1orf162Q8NEQ5 155 aaPredicted RBP4.18□□□□□ -1.74
ATG4A-204ENST00000372246 RNF183Q96D59 192 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 SCNM1Q9BWG6 230 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 LINC01549A6NIU2 74 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 FAM90A27PA6NNH2 459 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 C17orf100A8MU93 164 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 DPM2O94777 84 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 CRYGBP07316 175 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 GAGE5Q13069 117 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 GAGE6Q13070 117 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 TEX36Q5VZQ5 186 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 C3orf56Q8N813 242 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 RPL39LQ96EH5 51 aaKnown RBP4.18□□□□□ -1.74
ATG4A-204ENST00000372246 VKORC1Q9BQB6 163 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 MAP1LC3AQ9H492 121 aa4.18□□□□□ -1.74
ATG4A-204ENST00000372246 IGKV3-7A0A075B6H7 116 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 IGKV3D-20A0A0C4DH25 116 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 H7C2G1 150 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 SPINK8P0C7L1 97 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 CARD19Q96LW7 228 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 AAMDCQ9H7C9 122 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 ERG28Q9UKR5 140 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 ATRXP46100 2492 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 TLN1Q9Y490 2541 aaKnown RBP4.17□□□□□ -1.74
ATG4A-204ENST00000372246 NCBP2LA6PVI3 153 aaKnown RBP4.17□□□□□ -1.74
ATG4A-204ENST00000372246 INS-IGF2F8WCM5 200 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 BUB1B-PAK6H3BSN5 160 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 THBDP07204 575 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 IGLC6P0CF74 106 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 CRIP2P52943 208 aaPredicted RBP4.17□□□□□ -1.74
ATG4A-204ENST00000372246 RRN3P1Q2M238 152 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 TMEM155Q4W5P6 130 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 SMIM20Q8N5G0 67 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 DEFB123Q8N688 67 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 RPEQ96AT9 228 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 TM2D2Q9BX73 214 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 ZMAT4Q9H898 229 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 MRPL16Q9NX20 251 aaKnown RBP4.17□□□□□ -1.74
ATG4A-204ENST00000372246 TMEM14CQ9P0S9 112 aa4.17□□□□□ -1.74
ATG4A-204ENST00000372246 SPTAN1Q13813 2472 aaKnown RBP4.16□□□□□ -1.74
ATG4A-204ENST00000372246 IGHV3-64A0A075B6Q5 118 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 SRSF1Q07955 248 aaKnown RBP eCLIP4.16□□□□□ -1.74
ATG4A-204ENST00000372246 PRR9Q5T870 116 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 GATD1Q8NB37 220 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 LINC00527Q9UJ94 153 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 CSDC2Q9Y534 153 aaKnown RBP4.16□□□□□ -1.74
ATG4A-204ENST00000372246 COL6A6A6NMZ7 2263 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 IGLV2-18A0A075B6J9 118 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 TRBV7-3A0A075B6L6 115 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 TRBV20-1A0A075B6N2 111 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 F8W1H4 67 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 M0R381 172 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 IGLV1-47P01700 117 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 LGALS1P09382 135 aaKnown RBP4.16□□□□□ -1.74
ATG4A-204ENST00000372246 SLC25A16P16260 332 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 PRTN3P24158 256 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 FOXI1Q12951 378 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 TTC9CQ8N5M4 171 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 ZNF502Q8TBZ5 544 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 NRGNQ92686 78 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 DUX5Q96PT3 197 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 PIMREGQ9BSJ6 248 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 RAB9BQ9NP90 201 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 DYNLRB1Q9NP97 96 aa4.16□□□□□ -1.74
ATG4A-204ENST00000372246 MBD3L4A6NDZ8 208 aaPredicted RBP4.15□□□□□ -1.74
ATG4A-204ENST00000372246 MBD3L3A6NE82 208 aaPredicted RBP4.15□□□□□ -1.74
ATG4A-204ENST00000372246 MBD3L5A6NJ08 208 aaPredicted RBP4.15□□□□□ -1.74
ATG4A-204ENST00000372246 PRR30Q53SZ7 412 aaPredicted RBP4.15□□□□□ -1.74
ATG4A-204ENST00000372246 NRACQ8N912 160 aa4.15□□□□□ -1.74
ATG4A-204ENST00000372246 MBD3L2Q8NHZ7 208 aaPredicted RBP4.15□□□□□ -1.74
ATG4A-204ENST00000372246 AJUBAQ96IF1 538 aa4.15□□□□□ -1.74
ATG4A-204ENST00000372246 JPT2Q9H910 190 aa4.15□□□□□ -1.74
ATG4A-204ENST00000372246 TRAV17A0A0B4J275 112 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 A0A0G2JNJ9 132 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 B5MCH6 92 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 PAX4O43316 350 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 CRLF1O75462 422 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 ELANEP08246 267 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 PVRIGQ6DKI7 326 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 SCGB1D4Q6XE38 83 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 TRPT1Q86TN4 253 aaKnown RBP4.15□□□□□ -1.75
ATG4A-204ENST00000372246 DEFB124Q8NES8 71 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 OPRPNQ99935 248 aaPredicted RBP4.15□□□□□ -1.75
ATG4A-204ENST00000372246 PRADC1Q9BSG0 188 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 AGPAT4-IT1Q9H0P7 198 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 SPANXA1Q9NS26 97 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 Q9UFV3 132 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 ZNF580Q9UK33 172 aa4.15□□□□□ -1.75
ATG4A-204ENST00000372246 A0A087WX48 190 aa4.14□□□□□ -1.75
ATG4A-204ENST00000372246 ZNF815PA8K554 130 aa4.14□□□□□ -1.75
ATG4A-204ENST00000372246 E7EQL1 145 aa4.14□□□□□ -1.75
ATG4A-204ENST00000372246 F6UB75 175 aa4.14□□□□□ -1.75
ATG4A-204ENST00000372246 HOXA3O43365 443 aaPredicted RBP4.14□□□□□ -1.75
ATG4A-204ENST00000372246 TCL1BO95988 128 aa4.14□□□□□ -1.75
ATG4A-204ENST00000372246 MGPP08493 103 aa4.14□□□□□ -1.75
ATG4A-204ENST00000372246 TSPEAR-AS2P59090 65 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms