RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 TRAPPC1Q9Y5R8 145 aa13.43□□□□□ -0.26
CCDC17-201ENST00000372044 CAMPP49913 170 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 OR11H12B2RN74 326 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BKO60814 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BJP06899 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 TRGC1P0CF51 173 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BOP23527 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BBP33778 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 LEPP41159 167 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 CDKN1BP46527 198 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BDP58876 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 RAB5BP61020 215 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BCP62807 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST2H2BEQ16778 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 ANXA2RQ3ZCQ2 193 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.42□□□□□ -0.26
CCDC17-201ENST00000372044 OR2K2Q8NGT1 345 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BHQ93079 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BNQ99877 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 HIST1H2BMQ99879 126 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 ZNF747Q9BV97 191 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 C19orf73Q9NVV2 129 aa13.42□□□□□ -0.26
CCDC17-201ENST00000372044 XKRY2A2RUG3 117 aa13.41□□□□□ -0.26
CCDC17-201ENST00000372044 C7orf71A4D174 169 aa13.41□□□□□ -0.26
CCDC17-201ENST00000372044 SSBP4Q9BWG4 385 aaPredicted RBP13.41□□□□□ -0.26
CCDC17-201ENST00000372044 GNB1LQ9BYB4 327 aa13.41□□□□□ -0.26
CCDC17-201ENST00000372044 CRXO43186 299 aaPredicted RBP13.4□□□□□ -0.26
CCDC17-201ENST00000372044 RBMY1A1P0DJD3 496 aaKnown RBP13.4□□□□□ -0.26
CCDC17-201ENST00000372044 RBMY1CP0DJD4 496 aa13.4□□□□□ -0.26
CCDC17-201ENST00000372044 RPS20P60866 119 aaKnown RBP13.4□□□□□ -0.26
CCDC17-201ENST00000372044 RAB4BP61018 213 aa13.4□□□□□ -0.26
CCDC17-201ENST00000372044 RBMY1FQ15415 496 aaKnown RBP13.4□□□□□ -0.26
CCDC17-201ENST00000372044 FER1L6-AS1Q8NA97 138 aa13.4□□□□□ -0.26
CCDC17-201ENST00000372044 MRPL18Q9H0U6 180 aaKnown RBP13.4□□□□□ -0.26
CCDC17-201ENST00000372044 ATP5L2Q7Z4Y8 100 aa13.4□□□□□ -0.26
CCDC17-201ENST00000372044 A0A1B0GUT8 65 aa13.39□□□□□ -0.27
CCDC17-201ENST00000372044 GNRH2O43555 120 aa13.39□□□□□ -0.27
CCDC17-201ENST00000372044 SPRY2O43597 315 aa13.39□□□□□ -0.27
CCDC17-201ENST00000372044 CTRLP40313 264 aa13.39□□□□□ -0.27
CCDC17-201ENST00000372044 HBBP68871 147 aa13.39□□□□□ -0.27
CCDC17-201ENST00000372044 SLAQ13239 276 aa13.39□□□□□ -0.27
CCDC17-201ENST00000372044 KIAA1644Q3SXP7 199 aa13.38□□□□□ -0.27
CCDC17-201ENST00000372044 C9orf66Q5T8R8 295 aa13.38□□□□□ -0.27
CCDC17-201ENST00000372044 C3orf56Q8N813 242 aa13.38□□□□□ -0.27
CCDC17-201ENST00000372044 PKD1L1Q8TDX9 2849 aa13.38□□□□□ -0.27
CCDC17-201ENST00000372044 H3BVH4 76 aa13.37□□□□□ -0.27
CCDC17-201ENST00000372044 IGLL1P15814 213 aa13.37□□□□□ -0.27
CCDC17-201ENST00000372044 TSPOP30536 169 aa13.37□□□□□ -0.27
CCDC17-201ENST00000372044 WDR73Q6P4I2 378 aa13.37□□□□□ -0.27
CCDC17-201ENST00000372044 RASL11AQ6T310 242 aa13.37□□□□□ -0.27
CCDC17-201ENST00000372044 MSRB1Q9NZV6 116 aa13.37□□□□□ -0.27
CCDC17-201ENST00000372044 TP53TG3Q9ULZ0 132 aa13.37□□□□□ -0.27
CCDC17-201ENST00000372044 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
CCDC17-201ENST00000372044 STHQ8IWL8 128 aa13.36□□□□□ -0.27
CCDC17-201ENST00000372044 WFDC9Q8NEX5 89 aa13.36□□□□□ -0.27
CCDC17-201ENST00000372044 OR10AG1Q8NH19 301 aa13.36□□□□□ -0.27
CCDC17-201ENST00000372044 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
CCDC17-201ENST00000372044 INSL3P51460 131 aa13.36□□□□□ -0.27
CCDC17-201ENST00000372044 LINC00518Q8N0U6 118 aa13.36□□□□□ -0.27
CCDC17-201ENST00000372044 NTF3P20783 257 aa13.35□□□□□ -0.27
CCDC17-201ENST00000372044 C12orf54Q6X4T0 127 aa13.35□□□□□ -0.27
CCDC17-201ENST00000372044 CNFNQ9BYD5 112 aa13.35□□□□□ -0.27
CCDC17-201ENST00000372044 TIMM8BQ9Y5J9 83 aaPredicted RBP13.35□□□□□ -0.27
CCDC17-201ENST00000372044 MT-ND6P03923 174 aa13.34□□□□□ -0.27
CCDC17-201ENST00000372044 PRM2P04554 102 aa13.34□□□□□ -0.27
CCDC17-201ENST00000372044 RNASE3P12724 160 aaKnown RBP13.34□□□□□ -0.27
CCDC17-201ENST00000372044 RIGQ13278 110 aa13.34□□□□□ -0.27
CCDC17-201ENST00000372044 FAM159AQ6UWV7 190 aa13.34□□□□□ -0.27
CCDC17-201ENST00000372044 FAM110AQ9BQ89 295 aa13.34□□□□□ -0.27
CCDC17-201ENST00000372044 NDUFA6P56556 154 aa13.33□□□□□ -0.27
CCDC17-201ENST00000372044 SNRPEP62304 92 aaKnown RBP13.33□□□□□ -0.27
CCDC17-201ENST00000372044 COX19Q49B96 90 aa13.33□□□□□ -0.27
CCDC17-201ENST00000372044 SNAI2O43623 268 aa13.33□□□□□ -0.28
CCDC17-201ENST00000372044 APCSP02743 223 aa13.33□□□□□ -0.28
CCDC17-201ENST00000372044 TWIST1Q15672 202 aa13.33□□□□□ -0.28
CCDC17-201ENST00000372044 DEFB125Q8N687 156 aa13.33□□□□□ -0.28
CCDC17-201ENST00000372044 TMEM158Q8WZ71 300 aa13.33□□□□□ -0.28
CCDC17-201ENST00000372044 CLUHP3Q96NS8 147 aa13.33□□□□□ -0.28
CCDC17-201ENST00000372044 XCL2Q9UBD3 114 aa13.33□□□□□ -0.28
CCDC17-201ENST00000372044 OR5AL1P0C617 328 aa13.32□□□□□ -0.28
CCDC17-201ENST00000372044 TDRG1Q3Y452 100 aa13.32□□□□□ -0.28
CCDC17-201ENST00000372044 SHISA2Q6UWI4 295 aa13.32□□□□□ -0.28
CCDC17-201ENST00000372044 BORCS7Q96B45 105 aa13.32□□□□□ -0.28
CCDC17-201ENST00000372044 F2Z2F3 143 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 ASIPP42127 132 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 Q8N1Y9 231 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 GATD1Q8NB37 220 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 IGHV1OR15-1A0A075B7D0 117 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 C5orf52A6NGY3 159 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 GIG44P09565 113 aaPredicted RBP13.31□□□□□ -0.28
CCDC17-201ENST00000372044 RPL35AP18077 110 aaKnown RBP13.31□□□□□ -0.28
CCDC17-201ENST00000372044 CMC4P56277 68 aaPredicted RBP13.31□□□□□ -0.28
CCDC17-201ENST00000372044 MDFICQ9P1T7 246 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 ANK2Q01484 3957 aa13.31□□□□□ -0.28
CCDC17-201ENST00000372044 S100A6P06703 90 aa13.3□□□□□ -0.28
CCDC17-201ENST00000372044 S100A4P26447 101 aaKnown RBP13.3□□□□□ -0.28
CCDC17-201ENST00000372044 DNLZQ5SXM8 178 aa13.3□□□□□ -0.28
CCDC17-201ENST00000372044 SCRT2Q9NQ03 307 aa13.3□□□□□ -0.28
CCDC17-201ENST00000372044 NACAE9PAV3 2078 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms