RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 NPYP01303 97 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 IL4P05112 153 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 NMUP48645 174 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 C9orf139Q6ZV77 190 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 DYNAPQ8N1N2 210 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 RPEQ96AT9 228 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 AJUBAQ96IF1 538 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 DUX5Q96PT3 197 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 PRR25Q96S07 402 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 TPPP3Q9BW30 176 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 FBXL15Q9H469 300 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 DPM3Q9P2X0 92 aa8.84□□□□□ -0.99
TSPAN1-201ENST00000372003 LY6LH3BQJ8 138 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 J3QR89 54 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 FCGR2BP31994 310 aaPredicted RBP8.83□□□□□ -1
TSPAN1-201ENST00000372003 ODF1Q14990 250 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 MINOS1Q5TGZ0 78 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 PCP2Q8IVA1 136 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 ZNF418Q8TF45 676 aaPredicted RBP8.83□□□□□ -1
TSPAN1-201ENST00000372003 HHLA3Q9XRX5 114 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 MINOS1-NBL1R4GNA1 71 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 NPIPB5A8MRT5 1133 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 F8W1H4 67 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 LINC01619G3V211 115 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 IGKCP01834 107 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 MFAP4P55083 255 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 RIPPLY3P57055 190 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 TWIST1Q15672 202 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 NPBQ8NG41 125 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 RNF185Q96GF1 192 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 VGLL1Q99990 258 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 CHAC1Q9BUX1 264 aa8.83□□□□□ -1
TSPAN1-201ENST00000372003 M0R3E3 92 aa8.82□□□□□ -1
TSPAN1-201ENST00000372003 HOXA3O43365 443 aaPredicted RBP8.82□□□□□ -1
TSPAN1-201ENST00000372003 GNG7O60262 68 aa8.82□□□□□ -1
TSPAN1-201ENST00000372003 NDUFA3O95167 84 aa8.82□□□□□ -1
TSPAN1-201ENST00000372003 EGR2P11161 476 aaPredicted RBP8.82□□□□□ -1
TSPAN1-201ENST00000372003 Q6YL49 198 aa8.82□□□□□ -1
TSPAN1-201ENST00000372003 PHLDA1Q8WV24 401 aaPredicted RBP8.82□□□□□ -1
TSPAN1-201ENST00000372003 RAB37Q96AX2 223 aa8.82□□□□□ -1
TSPAN1-201ENST00000372003 NAV3Q8IVL0 2385 aa8.82□□□□□ -1
TSPAN1-201ENST00000372003 RBAKDNA6NC62 111 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 E9PLD3 99 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 DPM2O94777 84 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 CNIH1O95406 144 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 IGHV4-59P01825 116 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 APELAP0DMC3 54 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 SAMD13Q5VXD3 122 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 ZNF562Q6V9R5 426 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 FOXI2Q6ZQN5 318 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 CEND1Q8N111 149 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 Q8N8P6 123 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 DKK2Q9UBU2 259 aa8.81□□□□□ -1
TSPAN1-201ENST00000372003 NSD1Q96L73 2696 aaPredicted RBP8.81□□□□□ -1
TSPAN1-201ENST00000372003 IGLV11-55A0A075B6I3 123 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 FABP5P3A8MUU1 101 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 NBR2O15453 112 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 GCSHP23434 173 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 LEPP41159 167 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 RAB9AP51151 201 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 LY6EQ16553 131 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 ARPC1AQ92747 370 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 ESM1Q9NQ30 184 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 DNAJC9-AS1A6NH13 148 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 H3BUX3 64 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 TNFRSF6BO95407 300 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 HILS1P60008 231 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 CCDC144NLQ6NUI1 221 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 PRIMA1Q86XR5 153 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 ASCL2Q99929 193 aa8.8□□□□□ -1
TSPAN1-201ENST00000372003 NIPBLQ6KC79 2804 aaeCLIP8.79□□□□□ -1
TSPAN1-201ENST00000372003 MXRA5Q9NR99 2828 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 TMSB15BA0A087X1C1 80 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 TIMM23O14925 209 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 PRSS1P07477 247 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 FXYD2P54710 66 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 TTC9CQ8N5M4 171 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 SIGMAR1Q99720 223 aa8.79□□□□□ -1
TSPAN1-201ENST00000372003 OOSP1A8MZH6 123 aa8.78□□□□□ -1
TSPAN1-201ENST00000372003 HES1Q14469 280 aa8.78□□□□□ -1
TSPAN1-201ENST00000372003 CD300EQ496F6 205 aaPredicted RBP8.78□□□□□ -1
TSPAN1-201ENST00000372003 ZNF502Q8TBZ5 544 aa8.78□□□□□ -1
TSPAN1-201ENST00000372003 C21orf62Q9NYP8 219 aa8.78□□□□□ -1
TSPAN1-201ENST00000372003 CUBNO60494 3623 aa8.78□□□□□ -1
TSPAN1-201ENST00000372003 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 IGKV2-40A0A087WW87 121 aaPredicted RBP8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 IGKV2D-26A0A0A0MRZ7 120 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 IGLL5B9A064 214 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 SMKR1H3BMG3 65 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 IGKV2D-40P01614 121 aaPredicted RBP8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 RPL24P83731 157 aaKnown RBP8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 TMEM219Q86XT9 240 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 MYOZ3Q8TDC0 251 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 SPATA25Q9BR10 227 aa8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 NAA38Q9BRA0 125 aaKnown RBP8.77□□□□□ -1.01
TSPAN1-201ENST00000372003 IGHV4-4A0A075B6R2 117 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms