RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 GRIFINA4D1Z8 144 aa19.49■□□□□ 0.71
ATPAF1-202ENST00000371937 OR11H12B2RN74 326 aa19.49■□□□□ 0.71
ATPAF1-202ENST00000371937 KIR3DS1Q14943 382 aa19.49■□□□□ 0.71
ATPAF1-202ENST00000371937 AMTNQ6UX39 209 aa19.49■□□□□ 0.71
ATPAF1-202ENST00000371937 Q6ZQT7 251 aa19.49■□□□□ 0.71
ATPAF1-202ENST00000371937 C7orf71A4D174 169 aa19.48■□□□□ 0.71
ATPAF1-202ENST00000371937 S100A8P05109 93 aa19.48■□□□□ 0.71
ATPAF1-202ENST00000371937 CTRLP40313 264 aa19.48■□□□□ 0.71
ATPAF1-202ENST00000371937 INSL3P51460 131 aa19.48■□□□□ 0.71
ATPAF1-202ENST00000371937 F2Z2F3 143 aa19.48■□□□□ 0.71
ATPAF1-202ENST00000371937 ARMS2P0C7Q2 107 aa19.48■□□□□ 0.71
ATPAF1-202ENST00000371937 NAGKQ9UJ70 344 aa19.48■□□□□ 0.71
ATPAF1-202ENST00000371937 M0R2Z0 102 aa19.46■□□□□ 0.71
ATPAF1-202ENST00000371937 ZNF124Q15973 351 aa19.46■□□□□ 0.71
ATPAF1-202ENST00000371937 SPINK13Q1W4C9 94 aa19.46■□□□□ 0.71
ATPAF1-202ENST00000371937 FAM110AQ9BQ89 295 aa19.46■□□□□ 0.71
ATPAF1-202ENST00000371937 CLUHP3Q96NS8 147 aa19.46■□□□□ 0.71
ATPAF1-202ENST00000371937 AGRNO00468 2067 aa19.45■□□□□ 0.7
ATPAF1-202ENST00000371937 TRAV12-3A0A0B4J271 114 aa19.45■□□□□ 0.7
ATPAF1-202ENST00000371937 BEAN1Q3B7T3 259 aa19.45■□□□□ 0.7
ATPAF1-202ENST00000371937 C9orf66Q5T8R8 295 aa19.45■□□□□ 0.7
ATPAF1-202ENST00000371937 GFI1BQ5VTD9 330 aa19.45■□□□□ 0.7
ATPAF1-202ENST00000371937 APCSP02743 223 aa19.44■□□□□ 0.7
ATPAF1-202ENST00000371937 ANXA2RQ3ZCQ2 193 aa19.44■□□□□ 0.7
ATPAF1-202ENST00000371937 PRIMA1Q86XR5 153 aa19.44■□□□□ 0.7
ATPAF1-202ENST00000371937 ZNF324O75467 553 aaPredicted RBP19.44■□□□□ 0.7
ATPAF1-202ENST00000371937 FAM159AQ6UWV7 190 aa19.44■□□□□ 0.7
ATPAF1-202ENST00000371937 KCNS1Q96KK3 526 aa19.44■□□□□ 0.7
ATPAF1-202ENST00000371937 ZNF747Q9BV97 191 aa19.44■□□□□ 0.7
ATPAF1-202ENST00000371937 TRAV12-2A0A075B6T6 113 aa19.43■□□□□ 0.7
ATPAF1-202ENST00000371937 MUC21Q5SSG8 566 aa19.43■□□□□ 0.7
ATPAF1-202ENST00000371937 CNFNQ9BYD5 112 aa19.43■□□□□ 0.7
ATPAF1-202ENST00000371937 STHQ8IWL8 128 aa19.42■□□□□ 0.7
ATPAF1-202ENST00000371937 LOC105371267A0A1B0GV96 52 aa19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 NDUFA6P56556 154 aa19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 SSBP4Q9BWG4 385 aaPredicted RBP19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 OR5AL1P0C617 328 aa19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 ASIPP42127 132 aa19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 SNRPEP62304 92 aaKnown RBP19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 SLAQ13239 276 aa19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 MCRIP2Q9BUT9 160 aaKnown RBP19.41■□□□□ 0.7
ATPAF1-202ENST00000371937 C5orf52A6NGY3 159 aa19.4■□□□□ 0.7
ATPAF1-202ENST00000371937 GATD1Q8NB37 220 aa19.4■□□□□ 0.7
ATPAF1-202ENST00000371937 RBMY1BA6NDE4 496 aaKnown RBP19.39■□□□□ 0.7
ATPAF1-202ENST00000371937 RBMY1EA6NEQ0 496 aaKnown RBP19.39■□□□□ 0.7
ATPAF1-202ENST00000371937 RBMY1DP0C7P1 496 aaKnown RBP19.39■□□□□ 0.7
ATPAF1-202ENST00000371937 S100A4P26447 101 aaKnown RBP19.39■□□□□ 0.7
ATPAF1-202ENST00000371937 TDRG1Q3Y452 100 aa19.39■□□□□ 0.7
ATPAF1-202ENST00000371937 C3orf56Q8N813 242 aa19.39■□□□□ 0.7
ATPAF1-202ENST00000371937 SNAI2O43623 268 aa19.39■□□□□ 0.69
ATPAF1-202ENST00000371937 CD7P09564 240 aa19.39■□□□□ 0.69
ATPAF1-202ENST00000371937 NTF3P20783 257 aa19.39■□□□□ 0.69
ATPAF1-202ENST00000371937 TWIST1Q15672 202 aa19.39■□□□□ 0.69
ATPAF1-202ENST00000371937 DNLZQ5SXM8 178 aa19.39■□□□□ 0.69
ATPAF1-202ENST00000371937 MUC21A0A0G2JKD1 596 aa19.38■□□□□ 0.69
ATPAF1-202ENST00000371937 MUC21A0A140T8X8 626 aa19.38■□□□□ 0.69
ATPAF1-202ENST00000371937 MED14OSP0DP75 135 aa19.38■□□□□ 0.69
ATPAF1-202ENST00000371937 FXYD7P58549 80 aa19.38■□□□□ 0.69
ATPAF1-202ENST00000371937 SSTP61278 116 aa19.38■□□□□ 0.69
ATPAF1-202ENST00000371937 ZNF493Q6ZR52 646 aa19.37■□□□□ 0.69
ATPAF1-202ENST00000371937 WFDC9Q8NEX5 89 aa19.37■□□□□ 0.69
ATPAF1-202ENST00000371937 H3BVH4 76 aa19.37■□□□□ 0.69
ATPAF1-202ENST00000371937 KIAA1644Q3SXP7 199 aa19.37■□□□□ 0.69
ATPAF1-202ENST00000371937 TRPT1Q86TN4 253 aaKnown RBP19.37■□□□□ 0.69
ATPAF1-202ENST00000371937 CRXO43186 299 aaPredicted RBP19.36■□□□□ 0.69
ATPAF1-202ENST00000371937 GNRH2O43555 120 aa19.36■□□□□ 0.69
ATPAF1-202ENST00000371937 AMBPP02760 352 aa19.36■□□□□ 0.69
ATPAF1-202ENST00000371937 CACNG7P62955 275 aa19.36■□□□□ 0.69
ATPAF1-202ENST00000371937 TMEM158Q8WZ71 300 aa19.36■□□□□ 0.69
ATPAF1-202ENST00000371937 VWFP04275 2813 aa19.35■□□□□ 0.69
ATPAF1-202ENST00000371937 NUTF2P61970 127 aaKnown RBP19.35■□□□□ 0.69
ATPAF1-202ENST00000371937 SHISA2Q6UWI4 295 aa19.35■□□□□ 0.69
ATPAF1-202ENST00000371937 SPATA3Q8NHX4 192 aa19.35■□□□□ 0.69
ATPAF1-202ENST00000371937 C19orf73Q9NVV2 129 aa19.35■□□□□ 0.69
ATPAF1-202ENST00000371937 IGHV1OR15-1A0A075B7D0 117 aa19.35■□□□□ 0.69
ATPAF1-202ENST00000371937 C12orf54Q6X4T0 127 aa19.35■□□□□ 0.69
ATPAF1-202ENST00000371937 IGHV4-4A0A075B6R2 117 aa19.34■□□□□ 0.69
ATPAF1-202ENST00000371937 SPANXN1Q5VSR9 72 aa19.34■□□□□ 0.69
ATPAF1-202ENST00000371937 OR10AG1Q8NH19 301 aa19.34■□□□□ 0.69
ATPAF1-202ENST00000371937 COA6Q5JTJ3 125 aaKnown RBP19.33■□□□□ 0.69
ATPAF1-202ENST00000371937 C20orf144Q9BQM9 153 aa19.33■□□□□ 0.69
ATPAF1-202ENST00000371937 UBE2CO00762 179 aa19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 SRIP30626 198 aa19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 SCRT2Q9NQ03 307 aa19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 LOC102724200A0A096LPH7 203 aaPredicted RBP19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 HOXA5P20719 270 aa19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 TMEM191AQ9H0A3 160 aa19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 PHLDA3Q9Y5J5 127 aa19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 TIMM8BQ9Y5J9 83 aaPredicted RBP19.32■□□□□ 0.68
ATPAF1-202ENST00000371937 FBN1P35555 2871 aaKnown RBP19.31■□□□□ 0.68
ATPAF1-202ENST00000371937 INSP01308 110 aa19.31■□□□□ 0.68
ATPAF1-202ENST00000371937 RNASE3P12724 160 aaKnown RBP19.31■□□□□ 0.68
ATPAF1-202ENST00000371937 GTSCR1Q86UQ5 136 aa19.31■□□□□ 0.68
ATPAF1-202ENST00000371937 MSRB1Q9NZV6 116 aa19.31■□□□□ 0.68
ATPAF1-202ENST00000371937 Q0VG73 95 aa19.3■□□□□ 0.68
ATPAF1-202ENST00000371937 FAM104BQ5XKR9 115 aa19.3■□□□□ 0.68
ATPAF1-202ENST00000371937 SMIM15Q7Z3B0 74 aa19.3■□□□□ 0.68
ATPAF1-202ENST00000371937 RBMY1A1P0DJD3 496 aaKnown RBP19.29■□□□□ 0.68
ATPAF1-202ENST00000371937 RBMY1CP0DJD4 496 aa19.29■□□□□ 0.68
ATPAF1-202ENST00000371937 RBMY1FQ15415 496 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms