RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CYSLTR1Q9Y271 337 aa13.41□□□□□ -0.26
CHTOP-203ENST00000368690 LRBAP50851 2863 aa13.4□□□□□ -0.26
CHTOP-203ENST00000368690 TRGV3P03979 118 aa13.4□□□□□ -0.26
CHTOP-203ENST00000368690 INSL3P51460 131 aa13.4□□□□□ -0.26
CHTOP-203ENST00000368690 PRB3Q04118 309 aaPredicted RBP13.4□□□□□ -0.26
CHTOP-203ENST00000368690 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
CHTOP-203ENST00000368690 CLUHP3Q96NS8 147 aa13.4□□□□□ -0.26
CHTOP-203ENST00000368690 VCX2Q9H322 139 aa13.4□□□□□ -0.26
CHTOP-203ENST00000368690 IGHV7-4-1A0A0J9YVY3 117 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 ERCC8Q13216 396 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 ZNF418Q8TF45 676 aaPredicted RBP13.39□□□□□ -0.27
CHTOP-203ENST00000368690 ITLN2Q8WWU7 325 aaPredicted RBP13.39□□□□□ -0.27
CHTOP-203ENST00000368690 ATP5G2Q06055 141 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 ORMDL2Q53FV1 153 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 IGFL4Q6B9Z1 124 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 C8orf86Q6ZUL3 223 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 LY6G5BQ8NDX9 201 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
CHTOP-203ENST00000368690 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 HIF1ANQ9NWT6 349 aa13.39□□□□□ -0.27
CHTOP-203ENST00000368690 PPIFP30405 207 aaKnown RBP13.38□□□□□ -0.27
CHTOP-203ENST00000368690 TOMM6Q96B49 74 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 CDIP1Q9H305 208 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 COL12A1Q99715 3063 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 ABCA4P78363 2273 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 LGALS1P09382 135 aaKnown RBP13.38□□□□□ -0.27
CHTOP-203ENST00000368690 UBE2D1P51668 147 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 LYRM7Q5U5X0 104 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 NEXN-AS1Q8NBZ9 246 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 C20orf78Q9BR46 151 aa13.38□□□□□ -0.27
CHTOP-203ENST00000368690 PRAC2D3DTV9 90 aa13.37□□□□□ -0.27
CHTOP-203ENST00000368690 EFNA4P52798 201 aa13.37□□□□□ -0.27
CHTOP-203ENST00000368690 CRYBA4P53673 196 aa13.37□□□□□ -0.27
CHTOP-203ENST00000368690 PGPEP1Q9NXJ5 209 aa13.37□□□□□ -0.27
CHTOP-203ENST00000368690 C11orf21Q9P2W6 132 aa13.37□□□□□ -0.27
CHTOP-203ENST00000368690 B9A039 149 aa13.37□□□□□ -0.27
CHTOP-203ENST00000368690 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
CHTOP-203ENST00000368690 SMCPP49901 116 aaPredicted RBP13.36□□□□□ -0.27
CHTOP-203ENST00000368690 TMEM78Q5T7P6 136 aa13.36□□□□□ -0.27
CHTOP-203ENST00000368690 SYT8Q8NBV8 401 aa13.36□□□□□ -0.27
CHTOP-203ENST00000368690 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.35□□□□□ -0.27
CHTOP-203ENST00000368690 SCGB3A1Q96QR1 104 aa13.35□□□□□ -0.27
CHTOP-203ENST00000368690 BUB3O43684 328 aa13.35□□□□□ -0.27
CHTOP-203ENST00000368690 UBE2D3P61077 147 aa13.35□□□□□ -0.27
CHTOP-203ENST00000368690 UBE2D2P62837 147 aa13.35□□□□□ -0.27
CHTOP-203ENST00000368690 AGPAT4-IT1Q9H0P7 198 aa13.35□□□□□ -0.27
CHTOP-203ENST00000368690 ONECUT1Q9UBC0 465 aa13.35□□□□□ -0.27
CHTOP-203ENST00000368690 FLNCQ14315 2725 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 MYO18BQ8IUG5 2567 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 TRAV26-1A0A087WT03 109 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 KLK9Q2XQG4 91 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 KLK9Q9UKQ9 250 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 UFC1Q9Y3C8 167 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 ZNF462Q96JM2 2506 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 TRAV26-2A0A0B4J265 109 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 CENPVL3A0A0U1RRI6 287 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 ODF3BA8MYP8 253 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 NDPQ00604 133 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 SPANXN1Q5VSR9 72 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 PPDPFLQ8WWR9 84 aa13.34□□□□□ -0.27
CHTOP-203ENST00000368690 SPINK8P0C7L1 97 aa13.33□□□□□ -0.28
CHTOP-203ENST00000368690 C9orf47Q6ZRZ4 202 aa13.33□□□□□ -0.28
CHTOP-203ENST00000368690 ZNF843Q8N446 348 aa13.33□□□□□ -0.28
CHTOP-203ENST00000368690 ZFAND3Q9H8U3 227 aa13.33□□□□□ -0.28
CHTOP-203ENST00000368690 C19orf84I3L1E1 186 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 IGHV3-23P01764 117 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 Q8N6K4 173 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 PRADC1Q9BSG0 188 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 HRNRQ86YZ3 2850 aaPredicted RBP13.32□□□□□ -0.28
CHTOP-203ENST00000368690 COX6B1P14854 86 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 HES1Q14469 280 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 SBSPONQ8IVN8 264 aa13.32□□□□□ -0.28
CHTOP-203ENST00000368690 SPTAN1Q13813 2472 aaKnown RBP13.32□□□□□ -0.28
CHTOP-203ENST00000368690 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 M0R1W7 72 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 TSPAN13O95857 204 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 SUMO2P61956 95 aaKnown RBP13.31□□□□□ -0.28
CHTOP-203ENST00000368690 Q6ZUT4 128 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 TEN1Q86WV5 123 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 LINC01549A6NIU2 74 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 ZNF815PA8K554 130 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 OOSP1A8MZH6 123 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 EBI3Q14213 229 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 RNF182Q8N6D2 247 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 LENEPQ9Y5L5 61 aa13.31□□□□□ -0.28
CHTOP-203ENST00000368690 M0R381 172 aa13.3□□□□□ -0.28
CHTOP-203ENST00000368690 CD7P09564 240 aa13.3□□□□□ -0.28
CHTOP-203ENST00000368690 BAALCQ8WXS3 180 aa13.3□□□□□ -0.28
CHTOP-203ENST00000368690 TRAV8-2A0A0B4J237 113 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 PRTN3P24158 256 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 PSMB2P49721 201 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 PAPPA-AS1Q5QFB9 102 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 PRSS29PA6NIE9 313 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 LYNX1G3V0Z9 82 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 PPP1R17O96001 155 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 MT-ATP8P03928 68 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 LYNX1P0DP58 116 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 SRSF9Q13242 221 aaKnown RBP eCLIP13.28□□□□□ -0.281e-7■□□□□ 8.6
CHTOP-203ENST00000368690 SCGB1D4Q6XE38 83 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms