RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 LOXL1Q08397 574 aaPredicted RBP8.23□□□□□ -1.09
TPM3-212ENST00000368533 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 MS4A6AQ9H2W1 248 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 F8W735 103 aaPredicted RBP8.23□□□□□ -1.09
TPM3-212ENST00000368533 OR5AL1P0C617 328 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 IGFL4Q6B9Z1 124 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 SHANK2-AS3Q9BTD1 123 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 PRSS22Q9GZN4 317 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 AAMDCQ9H7C9 122 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 TRBV19A0A075B6N1 114 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 C19orf71A6NCJ1 209 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 HOXA3O43365 443 aaPredicted RBP8.23□□□□□ -1.09
TPM3-212ENST00000368533 TRBV12-3P01733 135 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 PF4V1P10720 104 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 FXYD2P54710 66 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 LINC01545Q5VT33 79 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 TTC9CQ8N5M4 171 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 ZNF491Q8N8L2 437 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 HSPB8Q9UJY1 196 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 PSG8Q9UQ74 426 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 SORL1Q92673 2214 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 H3BMG7 143 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 APOHP02749 345 aaPredicted RBP8.22□□□□□ -1.09
TPM3-212ENST00000368533 TRGV3P03979 118 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 CSN1S1P47710 185 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 MFAP4P55083 255 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 ZNF492Q9P255 531 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 NPIPB5A8MRT5 1133 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 ARMS2P0C7Q2 107 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 SMIM17P0DL12 118 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 C20orf78Q9BR46 151 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 TMEM14CQ9P0S9 112 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 NIPBLQ6KC79 2804 aaeCLIP8.22□□□□□ -1.096e-7■■■□□ 15
TPM3-212ENST00000368533 AGRNO00468 2067 aa8.22□□□□□ -1.09
TPM3-212ENST00000368533 A0A1B0GUT8 65 aa8.21□□□□□ -1.09
TPM3-212ENST00000368533 PVRIGQ6DKI7 326 aa8.21□□□□□ -1.09
TPM3-212ENST00000368533 FN1P02751 2386 aaKnown RBP8.21□□□□□ -1.1
TPM3-212ENST00000368533 A6NDX4 124 aa8.21□□□□□ -1.1
TPM3-212ENST00000368533 CACNG7P62955 275 aa8.21□□□□□ -1.1
TPM3-212ENST00000368533 FAM162BQ5T6X4 162 aa8.21□□□□□ -1.1
TPM3-212ENST00000368533 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.1
TPM3-212ENST00000368533 ZNF747Q9BV97 191 aa8.21□□□□□ -1.1
TPM3-212ENST00000368533 IGKV3-7A0A075B6H7 116 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 H3BRN7 92 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 IGLV2-11P01706 119 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 SCGB1A1P11684 91 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 RIGQ13278 110 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 CT83Q5H943 113 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 C8orf49Q96NF6 230 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 CTSGP08311 255 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 SIGLEC15Q6ZMC9 328 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 PRSS3P2Q8NHM4 247 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 CCDC140Q96MF4 163 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 SETXQ7Z333 2677 aaKnown RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 SRSF2Q01130 221 aaKnown RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 ANXA2RQ3ZCQ2 193 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 FAM110DQ8TAY7 271 aaPredicted RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 VGLL1Q99990 258 aa8.2□□□□□ -1.1
TPM3-212ENST00000368533 NHP2Q9NX24 153 aaKnown RBP8.2□□□□□ -1.1
TPM3-212ENST00000368533 C11orf44Q8N8P7 122 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 ZNF414Q96IQ9 312 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 GFRA4Q9GZZ7 299 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 AP5S1Q9NUS5 200 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 TEP1Q99973 2627 aaKnown RBP8.19□□□□□ -1.1
TPM3-212ENST00000368533 SMIM13P0DJ93 91 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 FA2HQ7L5A8 372 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 RNF183Q96D59 192 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 YAE1D1Q9NRH1 226 aa8.19□□□□□ -1.1
TPM3-212ENST00000368533 BOD1L2Q8IYS8 172 aa8.18□□□□□ -1.1
TPM3-212ENST00000368533 Q8TAT8 98 aa8.18□□□□□ -1.1
TPM3-212ENST00000368533 TMEM189A5PLL7 270 aa8.18□□□□□ -1.1
TPM3-212ENST00000368533 IFI27P40305 119 aaPredicted RBP8.18□□□□□ -1.1
TPM3-212ENST00000368533 MRAP2Q96G30 205 aa8.18□□□□□ -1.1
TPM3-212ENST00000368533 SFTA2Q6UW10 78 aa8.18□□□□□ -1.1
TPM3-212ENST00000368533 LRRC75A-AS1Q8N1F1 130 aa8.18□□□□□ -1.1
TPM3-212ENST00000368533 TMEM75Q8N9X5 138 aa8.18□□□□□ -1.1
TPM3-212ENST00000368533 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 HAX1O00165 279 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 MT-ATP8P03928 68 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 EDN2P20800 178 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 HLA-DMBP28068 263 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 DKK2Q9UBU2 259 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 TMEM213A2RRL7 107 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 CRIP1P50238 77 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 ZNF502Q8TBZ5 544 aa8.17□□□□□ -1.1
TPM3-212ENST00000368533 NOTCH3Q9UM47 2321 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 IGKV2D-26A0A0A0MRZ7 120 aa8.16□□□□□ -1.1
TPM3-212ENST00000368533 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms