RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PROP1O75360 226 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 NPYP01303 97 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 ORM2P19652 201 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 CD40P25942 277 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 PRB3Q04118 309 aaPredicted RBP7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 HRCT1Q6UXD1 115 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 TMEM160Q9NX00 188 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 PLXNB1O43157 2135 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 LYNX1G3V0Z9 82 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 SMKR1H3BMG3 65 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 OXTP01178 125 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 LYNX1P0DP58 116 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 SRSF2Q01130 221 aaKnown RBP7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 SLC25A48Q6ZT89 311 aaKnown RBP7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 TRPT1Q86TN4 253 aaKnown RBP7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 OR11H6Q8NGC7 330 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 NTN5Q8WTR8 489 aaPredicted RBP7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 FXYD5Q96DB9 178 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 RTL8AQ9BWD3 113 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 U3KQK5 164 aa7.26□□□□□ -1.25
SMARCAL1-202ENST00000358207 PRSS1P07477 247 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 EFNA4P52798 201 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 HSPE1P61604 102 aaKnown RBP7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 HES1Q14469 280 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 PSMG4Q5JS54 123 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 AMN1Q8IY45 258 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 C10orf126Q8N4M7 172 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 PAXXQ9BUH6 204 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 NAV2Q8IVL1 2488 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 SONP18583 2426 aaKnown RBP7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 TEX15Q9BXT5 2789 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 FLNBO75369 2602 aaKnown RBP7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 IGHV3-43A0A0B4J1X8 118 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 DEFB108AA8MXU0 73 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 PSPNO60542 156 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 FCGR3BO75015 233 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 DPM2O94777 84 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 IGHV3-43DP0DP04 118 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 HOXB4P17483 251 aaPredicted RBP7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 C3orf36Q3SXR2 165 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 TMEM155Q4W5P6 130 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 ZNRF1Q8ND25 227 aa7.25□□□□□ -1.25
SMARCAL1-202ENST00000358207 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 TEX49A0A1B0GTD5 131 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 IGLV1-44P01699 117 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 TNCP24821 2201 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 SETD2Q9BYW2 2564 aaPredicted RBP7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 PGPA6NDG6 321 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 C12orf77C9JDV5 145 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 LOXP28300 417 aaPredicted RBP7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 KRTAP10-9P60411 292 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 TNFAIP6P98066 277 aaPredicted RBP7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 RIGQ13278 110 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 LINC00596Q86U02 117 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 PDPNQ86YL7 162 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 POM121L12Q8N7R1 296 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 TRAV8-4A0A0B4J246 113 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 LINC01619G3V211 115 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 ZNF134P52741 427 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 PATE2Q6UY27 113 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 CCL17Q92583 94 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 ASCL2Q99929 193 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 AAMDCQ9H7C9 122 aa7.24□□□□□ -1.25
SMARCAL1-202ENST00000358207 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 IQCF6A8MYZ5 107 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 J3QT63 122 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 TIMM23O14925 209 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 FSTL3O95633 263 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 EDN2P20800 178 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 MZT1Q08AG7 82 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 Q5XG85 94 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 TMEM219Q86XT9 240 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 MRAPQ8TCY5 172 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 SRSF12Q8WXF0 261 aaKnown RBP7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 LEAP2Q969E1 77 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 PRRC2AP48634 2157 aaKnown RBP7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 DSCAML1Q8TD84 2053 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 J3QLI3 93 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 MRPL51Q4U2R6 128 aaKnown RBP7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 TEX36Q5VZQ5 186 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 OR4C13Q8NGP0 309 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 ZNRF2Q8NHG8 242 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 LINC00477Q96M19 166 aa7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 ANKRD17O75179 2603 aaKnown RBP7.23□□□□□ -1.25
SMARCAL1-202ENST00000358207 TRGV11A0A075B6L2 103 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 LGALS1P09382 135 aaKnown RBP7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 LEPP41159 167 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 DLX1P56177 255 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 FAM104BQ5XKR9 115 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 ORMDL3Q8N138 153 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 H3BTX0 84 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 GAS8-AS1O95177 125 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 UTF1Q5T230 341 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms