RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 C14orf178Q8N769 122 aaPredicted RBP7.77□□□□□ -1.17
PTPRA-203ENST00000356147 ZNF418Q8TF45 676 aaPredicted RBP7.77□□□□□ -1.17
PTPRA-203ENST00000356147 MSRB2Q9Y3D2 182 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 HLA-DRB4X5D2U9 266 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 LOC107984156A0A0G2JMH3 177 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 OR11H12B2RN74 326 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 CIDEAO60543 219 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 MGPP08493 103 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 COX8CQ7Z4L0 72 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 ARL17AQ8IVW1 177 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 OR11H1Q8NG94 326 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 OR11H2Q8NH07 326 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 SCGB3A1Q96QR1 104 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 TRAV8-2A0A0B4J237 113 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 ATP6V0E1O15342 81 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 APOMO95445 188 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 RRN3P1Q2M238 152 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 OR11H6Q8NGC7 330 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 ZFP2Q6ZN57 461 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 ZNF502Q8TBZ5 544 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 PIFOQ8TCI5 191 aa7.76□□□□□ -1.17
PTPRA-203ENST00000356147 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
PTPRA-203ENST00000356147 MUC6Q6W4X9 2439 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 PRSS29PA6NIE9 313 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 LINC01549A6NIU2 74 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 F8W1H4 67 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 SRSF1Q07955 248 aaKnown RBP eCLIP7.75□□□□□ -1.17
PTPRA-203ENST00000356147 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 C8orf86Q6ZUL3 223 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 MRPL16Q9NX20 251 aaKnown RBP7.75□□□□□ -1.17
PTPRA-203ENST00000356147 SORL1Q92673 2214 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 TRBV7-3A0A075B6L6 115 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 LY6G5BQ8NDX9 201 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 SPG11Q96JI7 2443 aa7.75□□□□□ -1.17
PTPRA-203ENST00000356147 IGHV3OR16-10A0A075B7F0 116 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 F6UB75 175 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 ZFP36P26651 326 aaKnown RBP7.74□□□□□ -1.17
PTPRA-203ENST00000356147 PSMB2P49721 201 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 MORN3Q6PF18 240 aaPredicted RBP7.74□□□□□ -1.17
PTPRA-203ENST00000356147 CCDC140Q96MF4 163 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 PRADC1Q9BSG0 188 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 SMPXQ9UHP9 88 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 RAXQ9Y2V3 346 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 MYMXA0A1B0GTQ4 84 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 F8VRH5 84 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 NDUFS8O00217 210 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 LGALS1P09382 135 aaKnown RBP7.74□□□□□ -1.17
PTPRA-203ENST00000356147 SLC25A16P16260 332 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 S100A4P26447 101 aaKnown RBP7.74□□□□□ -1.17
PTPRA-203ENST00000356147 SMIM2Q9BVW6 85 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 LINC01546A6NGU7 62 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 ZNF815PA8K554 130 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 H7C1H1 209 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 PRTN3P24158 256 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 SRSF9Q13242 221 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRA-203ENST00000356147 TMEM219Q86XT9 240 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 Q8N9W7 124 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 C16orf92Q96LL3 132 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
PTPRA-203ENST00000356147 ODF3BA8MYP8 253 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 J3QR89 54 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 HOXA3O43365 443 aaPredicted RBP7.73□□□□□ -1.17
PTPRA-203ENST00000356147 ARL3P36405 182 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 RAB9AP51151 201 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 RPL11P62913 178 aaKnown RBP7.73□□□□□ -1.17
PTPRA-203ENST00000356147 SYT8Q8NBV8 401 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 C20orf173Q96LM9 149 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.179e-12■■■■■ 45
PTPRA-203ENST00000356147 RASL10AQ92737 203 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 CREBBPQ92793 2442 aa7.73□□□□□ -1.17
PTPRA-203ENST00000356147 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 GNRH2O43555 120 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 PLNP26678 52 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
PTPRA-203ENST00000356147 ZNF48Q96MX3 618 aaPredicted RBP7.72□□□□□ -1.17
PTPRA-203ENST00000356147 CRYBG3Q68DQ2 2970 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 CCL21O00585 134 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 SRD5A1P18405 259 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 SUMO2P61956 95 aaKnown RBP7.72□□□□□ -1.17
PTPRA-203ENST00000356147 C2orf66Q6UXQ4 117 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 NFE4Q86UQ8 179 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 TIMD4Q96H15 378 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 ATP6V0BQ99437 205 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 DUSP14O95147 198 aaKnown RBP7.72□□□□□ -1.17
PTPRA-203ENST00000356147 CKS1BP61024 79 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 BAALCQ8WXS3 180 aa7.72□□□□□ -1.17
PTPRA-203ENST00000356147 TRBV12-3P01733 135 aa7.71□□□□□ -1.18
PTPRA-203ENST00000356147 FHL3Q13643 280 aa7.71□□□□□ -1.18
PTPRA-203ENST00000356147 JPT2Q9H910 190 aa7.71□□□□□ -1.18
PTPRA-203ENST00000356147 PHLDA3Q9Y5J5 127 aa7.71□□□□□ -1.18
PTPRA-203ENST00000356147 SCGB2A1O75556 95 aa7.71□□□□□ -1.18
PTPRA-203ENST00000356147 Q8N6K4 173 aa7.71□□□□□ -1.18
PTPRA-203ENST00000356147 METTL26Q96S19 204 aa7.71□□□□□ -1.18
PTPRA-203ENST00000356147 RNASE4P34096 147 aaKnown RBP7.7□□□□□ -1.18
PTPRA-203ENST00000356147 UNQ9165/PRO28630Q6UXU0 137 aa7.7□□□□□ -1.18
PTPRA-203ENST00000356147 NEXN-AS1Q8NBZ9 246 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms