RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 BUB3O43684 328 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 IGHV3-11P01762 117 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
NCDN-201ENST00000356090 SRD5A1P18405 259 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 C8orf86Q6ZUL3 223 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 F5H697 171 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 J3QR89 54 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 SRSF1Q07955 248 aaKnown RBP eCLIP10.29□□□□□ -0.76
NCDN-201ENST00000356090 CDSNQ15517 529 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
NCDN-201ENST00000356090 HIVEP3Q5T1R4 2406 aa10.28□□□□□ -0.76
NCDN-201ENST00000356090 A0A1B0GV72 72 aa10.28□□□□□ -0.76
NCDN-201ENST00000356090 A0A1B0GWB2 263 aa10.28□□□□□ -0.76
NCDN-201ENST00000356090 APOMO95445 188 aa10.28□□□□□ -0.76
NCDN-201ENST00000356090 ZFP36P26651 326 aaKnown RBP10.28□□□□□ -0.76
NCDN-201ENST00000356090 SLC50A1Q9BRV3 221 aa10.28□□□□□ -0.76
NCDN-201ENST00000356090 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.76
NCDN-201ENST00000356090 Q8N9W7 124 aa10.27□□□□□ -0.76
NCDN-201ENST00000356090 RPL39LQ96EH5 51 aaKnown RBP10.27□□□□□ -0.76
NCDN-201ENST00000356090 RAXQ9Y2V3 346 aa10.27□□□□□ -0.76
NCDN-201ENST00000356090 SPTBN4Q9H254 2564 aa10.27□□□□□ -0.76
NCDN-201ENST00000356090 RNASE4P34096 147 aaKnown RBP10.27□□□□□ -0.77
NCDN-201ENST00000356090 SAA4P35542 130 aa10.27□□□□□ -0.77
NCDN-201ENST00000356090 MRPL16Q9NX20 251 aaKnown RBP10.27□□□□□ -0.77
NCDN-201ENST00000356090 M0R1W7 72 aa10.27□□□□□ -0.77
NCDN-201ENST00000356090 C12orf74Q32Q52 190 aa10.27□□□□□ -0.77
NCDN-201ENST00000356090 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
NCDN-201ENST00000356090 ZNF418Q8TF45 676 aaPredicted RBP10.27□□□□□ -0.77
NCDN-201ENST00000356090 EEF1AKMT3Q96AZ1 226 aa10.27□□□□□ -0.77
NCDN-201ENST00000356090 IGLL5B9A064 214 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 F6UB75 175 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 AZU1P20160 251 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 PAX8Q06710 450 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 LY6EQ16553 131 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 LY6G5BQ8NDX9 201 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 SMPXQ9UHP9 88 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 ATP5G2Q06055 141 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 IGF2-ASQ6U949 168 aa10.26□□□□□ -0.77
NCDN-201ENST00000356090 ZNF48Q96MX3 618 aaPredicted RBP10.25□□□□□ -0.77
NCDN-201ENST00000356090 MSRB2Q9Y3D2 182 aa10.25□□□□□ -0.77
NCDN-201ENST00000356090 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
NCDN-201ENST00000356090 RAB9AP51151 201 aa10.25□□□□□ -0.77
NCDN-201ENST00000356090 GAGE13Q4V321 117 aa10.25□□□□□ -0.77
NCDN-201ENST00000356090 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
NCDN-201ENST00000356090 A0A087WX48 190 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 IGKV3-20P01619 116 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 FAM74A4Q5TZK3 123 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 PGPEP1Q9NXJ5 209 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 ODF3BA8MYP8 253 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 FAM110DQ8TAY7 271 aaPredicted RBP10.24□□□□□ -0.77
NCDN-201ENST00000356090 CCDC140Q96MF4 163 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 SMIM2Q9BVW6 85 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 H7C1H1 209 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 BRD3OSQ6XYD6 125 aa10.24□□□□□ -0.77
NCDN-201ENST00000356090 KLHL30-AS1Q8NEE0 82 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 ZFAND3Q9H8U3 227 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 H7C2G1 150 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 PLNP26678 52 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 PSMB2P49721 201 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 SUMO2P61956 95 aaKnown RBP10.23□□□□□ -0.77
NCDN-201ENST00000356090 PRR9Q5T870 116 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 TMEM190Q8WZ59 177 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 HIGD1BQ9P298 99 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 F8VRH5 84 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 ASIPP42127 132 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 C2orf66Q6UXQ4 117 aa10.23□□□□□ -0.77
NCDN-201ENST00000356090 GNRH2O43555 120 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 SLC25A16P16260 332 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 FOXI2Q6ZQN5 318 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 NRACQ8N912 160 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 PRADC1Q9BSG0 188 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 GAGE12HA6NDE8 117 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
NCDN-201ENST00000356090 PF4V1P10720 104 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 HLA-DRB4P13762 266 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 HLA-DRB4X5D2U9 266 aa10.22□□□□□ -0.77
NCDN-201ENST00000356090 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 TRAV8-2A0A0B4J237 113 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 SCGB1C2P0DMR2 95 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 INSL3P51460 131 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 LINC01549A6NIU2 74 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 ANXA2RQ3ZCQ2 193 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 MINOS1Q5TGZ0 78 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 ZNF575Q86XF7 245 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 MINOS1-NBL1R4GNA1 71 aa10.21□□□□□ -0.77
NCDN-201ENST00000356090 COL12A1Q99715 3063 aa10.21□□□□□ -0.78
NCDN-201ENST00000356090 A0A087WWL8 130 aa10.21□□□□□ -0.78
NCDN-201ENST00000356090 TRBV12-3P01733 135 aa10.21□□□□□ -0.78
NCDN-201ENST00000356090 CRYBA4P53673 196 aa10.21□□□□□ -0.78
NCDN-201ENST00000356090 SHISA2Q6UWI4 295 aa10.21□□□□□ -0.78
NCDN-201ENST00000356090 BPESC1Q9GZL8 116 aa10.21□□□□□ -0.78
NCDN-201ENST00000356090 CLPSL1A2RUU4 121 aa10.2□□□□□ -0.78
NCDN-201ENST00000356090 ORMDL2Q53FV1 153 aa10.2□□□□□ -0.78
NCDN-201ENST00000356090 CNFNQ9BYD5 112 aa10.2□□□□□ -0.78
NCDN-201ENST00000356090 C2CD3Q4AC94 2353 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms