RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 TRBV6-6A0A0A6YYG2 114 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 FAM236AA0A1B0GUQ0 79 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 FAM236BA0A1B0GV22 79 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 PRYO14603 147 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 VWCEQ96DN2 955 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 SPART-AS1P0CW21 52 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 GAFA1Q96PS6 74 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 SPATA25Q9BR10 227 aa6.28□□□□□ -1.4
VANGL1-202ENST00000355485 IGKV1D-17A0A075B6S4 117 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 SRSF2Q01130 221 aaKnown RBP6.27□□□□□ -1.41
VANGL1-202ENST00000355485 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 PYGO2Q9BRQ0 406 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 COA6Q5JTJ3 125 aaKnown RBP6.27□□□□□ -1.41
VANGL1-202ENST00000355485 MSRB2Q9Y3D2 182 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 LYPD2Q6UXB3 125 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 PRDM6Q9NQX0 595 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 SPATA12Q7Z6I5 190 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 RHOHQ15669 191 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 PKDREJQ9NTG1 2253 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 PFN2P35080 140 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 CFHR3Q02985 330 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 ARTNQ5T4W7 220 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 TNCP24821 2201 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 MPDZO75970 2070 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 KLK9Q9UKQ9 250 aa6.27□□□□□ -1.41
VANGL1-202ENST00000355485 IGLV3-19P01714 112 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 UTF1Q5T230 341 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 COL11A2P13942 1736 aaPredicted RBP6.26□□□□□ -1.41
VANGL1-202ENST00000355485 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 SIPA1L1O43166 1804 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 SIP14410 1827 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 UBE2D3P61077 147 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 CR1LQ2VPA4 569 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 FXYD5Q96DB9 178 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 NDUFC2O95298 119 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 ZNF672Q499Z4 452 aaPredicted RBP6.26□□□□□ -1.41
VANGL1-202ENST00000355485 XCL2Q9UBD3 114 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 DOCK3Q8IZD9 2030 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 CFC1BP0CG36 223 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 CFC1P0CG37 223 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 SHANK2-AS3Q9BTD1 123 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 TMEM14BQ9NUH8 114 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 DEFB131AP59861 70 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 RNF138Q8WVD3 245 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
VANGL1-202ENST00000355485 JMJD7-PLA2G4BH0Y9G9 81 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 IGLV3-12A0A075B6K2 115 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 H0Y9J4 135 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 FAM231DQ6ZW35 169 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 UBE2E1P51965 193 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 ZFP36L1Q07352 338 aaKnown RBP6.25□□□□□ -1.41
VANGL1-202ENST00000355485 DENND4AQ7Z401 1863 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 MED12Q93074 2177 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 I3L3M4 83 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 TCF20Q9UGU0 1960 aaKnown RBP6.25□□□□□ -1.41
VANGL1-202ENST00000355485 BAALC-AS2P0C853 105 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 CAMK2N2Q96S95 79 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 PCNX1Q96RV3 2341 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
VANGL1-202ENST00000355485 J3KT08 172 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 DIAPH2-AS1Q14236 149 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 MUSTN1Q8IVN3 82 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 IGHV1-8P0DP01 117 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 NXPH4O95158 308 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 BRD3OSQ6XYD6 125 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 RHPN1-AS1Q9BWJ2 59 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 TEX36Q5VZQ5 186 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 SIGLEC9Q9Y336 463 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 SMAD5-AS1Q9Y6J3 95 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 LRRK1Q38SD2 2015 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 A0A0U1RQV1 116 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 J3QQQ9 107 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 WDR86Q86TI4 376 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 SERP1Q9Y6X1 66 aa6.24□□□□□ -1.41
VANGL1-202ENST00000355485 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 C11orf52Q96A22 123 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 TMEM141Q96I45 108 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 GVINP1Q7Z2Y8 2422 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 ZNF503-AS2A6NEH8 195 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 HERVK_113P63121 156 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 LTBP1Q14766 1721 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 TRAV12-2A0A075B6T6 113 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 TSC2P49815 1807 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 LINC01545Q5VT33 79 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 MSRB1Q9NZV6 116 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 F8VRH5 84 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 IGHG2P01859 326 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 MUC4Q99102 2169 aa6.23□□□□□ -1.41
VANGL1-202ENST00000355485 PDE6HQ13956 83 aa6.22□□□□□ -1.41
VANGL1-202ENST00000355485 SHISA9B4DS77 424 aa6.22□□□□□ -1.41
VANGL1-202ENST00000355485 Q0VFX4 171 aa6.22□□□□□ -1.41
VANGL1-202ENST00000355485 LYPD1Q8N2G4 141 aa6.22□□□□□ -1.41
VANGL1-202ENST00000355485 ANK1P16157 1881 aa6.22□□□□□ -1.41
VANGL1-202ENST00000355485 SRRM5B3KS81 715 aa6.22□□□□□ -1.41
VANGL1-202ENST00000355485 USP17L23D6RBM5 183 aa6.22□□□□□ -1.41
VANGL1-202ENST00000355485 LOXL1Q08397 574 aaPredicted RBP6.22□□□□□ -1.41
VANGL1-202ENST00000355485 SBF1O95248 1867 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms