RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 IGKV3D-20A0A0C4DH25 116 aa17.5■□□□□ 0.39
HMGA2-201ENST00000354636 AZU1P20160 251 aa17.49■□□□□ 0.39
HMGA2-201ENST00000354636 RRN3P1Q2M238 152 aa17.49■□□□□ 0.39
HMGA2-201ENST00000354636 DAZAP1Q96EP5 407 aaKnown RBP17.49■□□□□ 0.39
HMGA2-201ENST00000354636 KCNS1Q96KK3 526 aa17.49■□□□□ 0.39
HMGA2-201ENST00000354636 TP53TG3Q9ULZ0 132 aa17.49■□□□□ 0.39
HMGA2-201ENST00000354636 ORM1P02763 201 aa17.48■□□□□ 0.39
HMGA2-201ENST00000354636 MIFP14174 115 aa17.48■□□□□ 0.39
HMGA2-201ENST00000354636 ADIRFQ15847 76 aa17.48■□□□□ 0.39
HMGA2-201ENST00000354636 LINC01559Q495D7 138 aa17.48■□□□□ 0.39
HMGA2-201ENST00000354636 CBY3A6NI87 242 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 C10orf91Q5T1B1 145 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 NUDT10Q8NFP7 164 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 ISOC2Q96AB3 205 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 NUDT11Q96G61 164 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 RNASE7Q9H1E1 156 aaKnown RBP17.47■□□□□ 0.39
HMGA2-201ENST00000354636 COL7A1Q02388 2944 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 KRBOX1C9JBD0 128 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 M0R036 132 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 FAM231DQ6ZW35 169 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 ZNF575Q86XF7 245 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 Q8NAQ8 132 aa17.47■□□□□ 0.39
HMGA2-201ENST00000354636 RNASE8Q8TDE3 154 aaKnown RBP17.47■□□□□ 0.39
HMGA2-201ENST00000354636 B4DEV8 164 aa17.46■□□□□ 0.39
HMGA2-201ENST00000354636 GNRH2O43555 120 aa17.46■□□□□ 0.39
HMGA2-201ENST00000354636 P01737 135 aa17.46■□□□□ 0.39
HMGA2-201ENST00000354636 TYMSP04818 313 aa17.46■□□□□ 0.39
HMGA2-201ENST00000354636 PNRC1Q12796 327 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-201ENST00000354636 IBA57Q5T440 356 aaKnown RBP17.46■□□□□ 0.39
HMGA2-201ENST00000354636 TMEM263Q8WUH6 116 aaKnown RBP17.46■□□□□ 0.39
HMGA2-201ENST00000354636 RPL19P84098 196 aaKnown RBP17.45■□□□□ 0.38
HMGA2-201ENST00000354636 ZNF493Q6ZR52 646 aa17.45■□□□□ 0.38
HMGA2-201ENST00000354636 IGHV4-28A0A0C4DH34 117 aa17.44■□□□□ 0.38
HMGA2-201ENST00000354636 ERVFC1-1P60608 527 aa17.44■□□□□ 0.38
HMGA2-201ENST00000354636 C16orf74Q96GX8 76 aa17.44■□□□□ 0.38
HMGA2-201ENST00000354636 CARHSP1Q9Y2V2 147 aaKnown RBP17.44■□□□□ 0.38
HMGA2-201ENST00000354636 TRGV11A0A075B6L2 103 aa17.43■□□□□ 0.38
HMGA2-201ENST00000354636 TMEM189A5PLL7 270 aa17.43■□□□□ 0.38
HMGA2-201ENST00000354636 DEFB4AO15263 64 aa17.43■□□□□ 0.38
HMGA2-201ENST00000354636 OSTCQ9NRP0 149 aa17.43■□□□□ 0.38
HMGA2-201ENST00000354636 TENM3Q9P273 2699 aa17.43■□□□□ 0.38
HMGA2-201ENST00000354636 TMSB15BA0A087X1C1 80 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 PLAC8L1A1L4L8 177 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 EMP1P54849 157 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 C11orf72Q8NBR9 251 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 OR2D3Q8NGH3 330 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 SFRP2Q96HF1 295 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 MDFICQ9P1T7 246 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 IGHV3-16A0A0C4DH30 117 aa17.42■□□□□ 0.38
HMGA2-201ENST00000354636 DNLZQ5SXM8 178 aa17.41■□□□□ 0.38
HMGA2-201ENST00000354636 RPP21Q9H633 154 aaKnown RBP17.41■□□□□ 0.38
HMGA2-201ENST00000354636 U3KQK5 164 aa17.41■□□□□ 0.38
HMGA2-201ENST00000354636 GRIFINA4D1Z8 144 aa17.4■□□□□ 0.38
HMGA2-201ENST00000354636 GATCO43716 136 aaKnown RBP17.4■□□□□ 0.38
HMGA2-201ENST00000354636 CXCL1P09341 107 aa17.4■□□□□ 0.38
HMGA2-201ENST00000354636 GSN-AS1Q9NRJ2 163 aa17.4■□□□□ 0.38
HMGA2-201ENST00000354636 ZNF415Q09FC8 603 aa17.39■□□□□ 0.37
HMGA2-201ENST00000354636 C15orf54Q8N8G6 183 aa17.39■□□□□ 0.37
HMGA2-201ENST00000354636 C11orf68Q9H3H3 251 aaKnown RBP17.39■□□□□ 0.37
HMGA2-201ENST00000354636 RNASE3P12724 160 aaKnown RBP17.38■□□□□ 0.37
HMGA2-201ENST00000354636 ASIPP42127 132 aa17.38■□□□□ 0.37
HMGA2-201ENST00000354636 TCL1AP56279 114 aa17.38■□□□□ 0.37
HMGA2-201ENST00000354636 RPS20P60866 119 aaKnown RBP17.38■□□□□ 0.37
HMGA2-201ENST00000354636 OR10G8Q8NGN5 311 aa17.38■□□□□ 0.37
HMGA2-201ENST00000354636 IL17DQ8TAD2 202 aa17.38■□□□□ 0.37
HMGA2-201ENST00000354636 A0A0J9YWU9 116 aa17.37■□□□□ 0.37
HMGA2-201ENST00000354636 V9GYV3 84 aa17.37■□□□□ 0.37
HMGA2-201ENST00000354636 XKRY2A2RUG3 117 aa17.37■□□□□ 0.37
HMGA2-201ENST00000354636 SNURFLB1AK76 121 aa17.37■□□□□ 0.37
HMGA2-201ENST00000354636 S100A4P26447 101 aaKnown RBP17.37■□□□□ 0.37
HMGA2-201ENST00000354636 CT83Q5H943 113 aa17.37■□□□□ 0.37
HMGA2-201ENST00000354636 IL36BQ9NZH7 164 aa17.37■□□□□ 0.37
HMGA2-201ENST00000354636 TIMM8BQ9Y5J9 83 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-201ENST00000354636 GZMBP10144 247 aa17.36■□□□□ 0.37
HMGA2-201ENST00000354636 DAZ2Q13117 558 aaKnown RBP17.36■□□□□ 0.37
HMGA2-201ENST00000354636 C9orf85Q96MD7 179 aa17.36■□□□□ 0.37
HMGA2-201ENST00000354636 ARMS2P0C7Q2 107 aa17.35■□□□□ 0.37
HMGA2-201ENST00000354636 NOP10Q9NPE3 64 aaKnown RBP17.35■□□□□ 0.37
HMGA2-201ENST00000354636 A8MWL6 223 aa17.34■□□□□ 0.37
HMGA2-201ENST00000354636 APOC3P02656 99 aa17.34■□□□□ 0.37
HMGA2-201ENST00000354636 RNF212Q495C1 297 aa17.34■□□□□ 0.37
HMGA2-201ENST00000354636 SPXQ9BT56 116 aa17.34■□□□□ 0.37
HMGA2-201ENST00000354636 H3BVH4 76 aa17.33■□□□□ 0.37
HMGA2-201ENST00000354636 IGLC6P0CF74 106 aa17.33■□□□□ 0.37
HMGA2-201ENST00000354636 MED14OSP0DP75 135 aa17.33■□□□□ 0.37
HMGA2-201ENST00000354636 SSBP4Q9BWG4 385 aaPredicted RBP17.33■□□□□ 0.37
HMGA2-201ENST00000354636 SCRT2Q9NQ03 307 aa17.33■□□□□ 0.37
HMGA2-201ENST00000354636 DKK2Q9UBU2 259 aa17.33■□□□□ 0.37
HMGA2-201ENST00000354636 PPP1R2P9O14990 202 aa17.32■□□□□ 0.36
HMGA2-201ENST00000354636 MT-ND4LP03901 98 aa17.32■□□□□ 0.36
HMGA2-201ENST00000354636 FAM222AQ5U5X8 452 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 CLRN3Q8NCR9 226 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 TSKUQ8WUA8 353 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 GTSF1Q8WW33 167 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 ANAPC16Q96DE5 110 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 LYRM9A8MSI8 78 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 SNAI2O43623 268 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 SPINK4O60575 86 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 OR5AL1P0C617 328 aa17.31■□□□□ 0.36
HMGA2-201ENST00000354636 SVBPQ8N300 66 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms