RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 FER1L6-AS1Q8NA97 138 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 DKK2Q9UBU2 259 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 SMAD5-AS1Q9Y6J3 95 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 IGHV3OR16-8A0A075B7F1 116 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 H3BRM9 83 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 H3BUT2 72 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 RPL7P18124 248 aaKnown RBP6.6□□□□□ -1.35
TRIM55-204ENST00000353317 NMUP48645 174 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 S100A7AQ86SG5 101 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 TTC9CQ8N5M4 171 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 OR9G4Q8NGQ1 327 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 C21orf62Q9NYP8 219 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 A6NDN8 102 aa6.59□□□□□ -1.35
TRIM55-204ENST00000353317 SAP30O75446 220 aa6.59□□□□□ -1.35
TRIM55-204ENST00000353317 KIR3DS1Q14943 382 aa6.59□□□□□ -1.35
TRIM55-204ENST00000353317 RNF185Q96GF1 192 aa6.59□□□□□ -1.35
TRIM55-204ENST00000353317 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
TRIM55-204ENST00000353317 SMR3AQ99954 134 aa6.59□□□□□ -1.35
TRIM55-204ENST00000353317 IGHV3-35A0A0C4DH35 117 aa6.59□□□□□ -1.36
TRIM55-204ENST00000353317 J3QLI3 93 aa6.59□□□□□ -1.36
TRIM55-204ENST00000353317 K7ERU9 68 aa6.59□□□□□ -1.36
TRIM55-204ENST00000353317 SIVA1O15304 175 aa6.59□□□□□ -1.36
TRIM55-204ENST00000353317 CTSGP08311 255 aa6.59□□□□□ -1.36
TRIM55-204ENST00000353317 HSD52Q0P140 79 aa6.59□□□□□ -1.36
TRIM55-204ENST00000353317 ECSCRQ19T08 205 aa6.59□□□□□ -1.36
TRIM55-204ENST00000353317 SETXQ7Z333 2677 aaKnown RBP6.58□□□□□ -1.36
TRIM55-204ENST00000353317 A0A0G2JLM5 398 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 BMI1P35226 326 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 TMEM95Q3KNT9 176 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 C19orf54Q5BKX5 351 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 ARL6IP6Q8N6S5 226 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 RAB37Q96AX2 223 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 AP1S3Q96PC3 154 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 DUX5Q96PT3 197 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 FOXC2Q99958 501 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 MOB4Q9Y3A3 225 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 ORM1P02763 201 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 CNFNQ9BYD5 112 aa6.58□□□□□ -1.36
TRIM55-204ENST00000353317 IGKV2D-26A0A0A0MRZ7 120 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 ERCC8Q13216 396 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 OR4X2Q8NGF9 303 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 TTTY13Q9BZ97 58 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 NPFFR1Q9GZQ6 430 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 HHLA3Q9XRX5 114 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 PRAC2D3DTV9 90 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 K7EP34 96 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-204ENST00000353317 EVI2AP22794 236 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 PPIFP30405 207 aaKnown RBP6.57□□□□□ -1.36
TRIM55-204ENST00000353317 LEPP41159 167 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 TM4SF20Q53R12 229 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 C10orf99Q6UWK7 81 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 LCNL1Q6ZST4 164 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 CSTL1Q9H114 145 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 MAP1LC3AQ9H492 121 aa6.57□□□□□ -1.36
TRIM55-204ENST00000353317 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 FBLL1A6NHQ2 334 aaKnown RBP6.56□□□□□ -1.36
TRIM55-204ENST00000353317 FABP5P3A8MUU1 101 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 TNFRSF6BO95407 300 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 ODF1Q14990 250 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 OR2K2Q8NGT1 345 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
TRIM55-204ENST00000353317 Q6YL49 198 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 C9orf139Q6ZV77 190 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 RNF182Q8N6D2 247 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 ZMAT4Q9H898 229 aa6.56□□□□□ -1.36
TRIM55-204ENST00000353317 A0A1W2PPM0 123 aa6.55□□□□□ -1.36
TRIM55-204ENST00000353317 HOXA3O43365 443 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-204ENST00000353317 IGHG2P01859 326 aa6.55□□□□□ -1.36
TRIM55-204ENST00000353317 FCER1GP30273 86 aa6.55□□□□□ -1.36
TRIM55-204ENST00000353317 FAM110DQ8TAY7 271 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-204ENST00000353317 KLK15Q9H2R5 256 aa6.55□□□□□ -1.36
TRIM55-204ENST00000353317 NSD1Q96L73 2696 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-204ENST00000353317 HIVEP2P31629 2446 aa6.55□□□□□ -1.36
TRIM55-204ENST00000353317 LINC01559Q495D7 138 aa6.55□□□□□ -1.36
TRIM55-204ENST00000353317 BAHCC1Q9P281 2608 aa6.55□□□□□ -1.36
TRIM55-204ENST00000353317 TRAV41A0A0B4J266 112 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 IGKV3D-20A0A0C4DH25 116 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 BUB3O43684 328 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 PRSS1P07477 247 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 S100A7P31151 101 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 FXYD2P54710 66 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 RIPPLY3P57055 190 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 KLK9Q2XQG4 91 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 C15orf32Q32M92 178 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 TMEM158Q8WZ71 300 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 CCDC140Q96MF4 163 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 NXT2Q9NPJ8 142 aaKnown RBP6.54□□□□□ -1.36
TRIM55-204ENST00000353317 KLK9Q9UKQ9 250 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 SPCS1Q9Y6A9 102 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 FN1P02751 2386 aaKnown RBP6.54□□□□□ -1.36
TRIM55-204ENST00000353317 IGHV3-66A0A0C4DH42 116 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 G3V4G9 280 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 IGF1P05019 195 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 GCSHP23434 173 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-204ENST00000353317 NEGR1Q7Z3B1 354 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms