RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 SCGB2A1O75556 95 aa12.65□□□□□ -0.38
PDAP1-201ENST00000350498 ODF1Q14990 250 aa12.65□□□□□ -0.38
PDAP1-201ENST00000350498 HHLA3Q9XRX5 114 aa12.65□□□□□ -0.38
PDAP1-201ENST00000350498 C9orf118A6NHY6 69 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 K7ERJ3 54 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 OR1N2Q8NGR9 330 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 FOXC2Q99958 501 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 UFC1Q9Y3C8 167 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 TRBV7-1A0A0A6YYK4 115 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 A0A0G2JLM5 398 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 PRB1P04280 392 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 SRD5A1P18405 259 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 ARL3P36405 182 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 PIMREGQ9BSJ6 248 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 USP24Q9UPU5 2620 aa12.64□□□□□ -0.39
PDAP1-201ENST00000350498 FXYD2P54710 66 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 RPS20P60866 119 aaKnown RBP12.63□□□□□ -0.39
PDAP1-201ENST00000350498 KLK9Q2XQG4 91 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 UFSP1Q6NVU6 142 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 KLK9Q9UKQ9 250 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 ZNF469Q96JG9 3925 aaPredicted RBP12.63□□□□□ -0.39
PDAP1-201ENST00000350498 F6UB75 175 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 GCSHP23434 173 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 DPF1Q92782 380 aa12.63□□□□□ -0.39
PDAP1-201ENST00000350498 HSD52Q0P140 79 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 C10orf99Q6UWK7 81 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 C16orf92Q96LL3 132 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 AP1S3Q96PC3 154 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 CNFNQ9BYD5 112 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 U3KQE9 123 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 H3BRM9 83 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 FCER1GP30273 86 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 PTPN13Q12923 2485 aa12.62□□□□□ -0.39
PDAP1-201ENST00000350498 MEGF9Q9H1U4 602 aa12.61□□□□□ -0.39
PDAP1-201ENST00000350498 TMEM160Q9NX00 188 aa12.61□□□□□ -0.39
PDAP1-201ENST00000350498 SORL1Q92673 2214 aa12.61□□□□□ -0.39
PDAP1-201ENST00000350498 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
PDAP1-201ENST00000350498 A6NDN8 102 aa12.61□□□□□ -0.39
PDAP1-201ENST00000350498 PF4V1P10720 104 aa12.61□□□□□ -0.39
PDAP1-201ENST00000350498 RIPPLY3P57055 190 aa12.61□□□□□ -0.39
PDAP1-201ENST00000350498 TMEM8BA6NDV4 472 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 PPBPP02775 128 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
PDAP1-201ENST00000350498 ZC2HC1BQ5TFG8 222 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 OR9G4Q8NGQ1 327 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 DEFB104AQ8WTQ1 72 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 TMEM78Q5T7P6 136 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 HIF1ANQ9NWT6 349 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 TEX15Q9BXT5 2789 aa12.6□□□□□ -0.39
PDAP1-201ENST00000350498 CLEC2AQ6UVW9 174 aa12.59□□□□□ -0.39
PDAP1-201ENST00000350498 OR2K2Q8NGT1 345 aa12.59□□□□□ -0.39
PDAP1-201ENST00000350498 MRPL35Q9NZE8 188 aaKnown RBP12.59□□□□□ -0.39
PDAP1-201ENST00000350498 NBPF19A0A087WUL8 3843 aa12.59□□□□□ -0.39
PDAP1-201ENST00000350498 H3BVH4 76 aa12.59□□□□□ -0.39
PDAP1-201ENST00000350498 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
PDAP1-201ENST00000350498 TMEM190Q8WZ59 177 aa12.59□□□□□ -0.39
PDAP1-201ENST00000350498 IGKCP01834 107 aa12.58□□□□□ -0.4
PDAP1-201ENST00000350498 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
PDAP1-201ENST00000350498 NRACQ8N912 160 aa12.58□□□□□ -0.4
PDAP1-201ENST00000350498 K7EP34 96 aa12.58□□□□□ -0.4
PDAP1-201ENST00000350498 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
PDAP1-201ENST00000350498 OR4X2Q8NGF9 303 aa12.58□□□□□ -0.4
PDAP1-201ENST00000350498 ZMAT4Q9H898 229 aa12.58□□□□□ -0.4
PDAP1-201ENST00000350498 NXT2Q9NPJ8 142 aaKnown RBP12.57□□□□□ -0.4
PDAP1-201ENST00000350498 SPCS1Q9Y6A9 102 aa12.57□□□□□ -0.4
PDAP1-201ENST00000350498 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
PDAP1-201ENST00000350498 A0A1W2PPM0 123 aa12.57□□□□□ -0.4
PDAP1-201ENST00000350498 A6NDX4 124 aa12.57□□□□□ -0.4
PDAP1-201ENST00000350498 MSMBP08118 114 aa12.57□□□□□ -0.4
PDAP1-201ENST00000350498 RAB9AP51151 201 aa12.57□□□□□ -0.4
PDAP1-201ENST00000350498 CHAC1Q9BUX1 264 aa12.57□□□□□ -0.4
PDAP1-201ENST00000350498 RBAKDNA6NC62 111 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 Q8N8P6 123 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 TLN2Q9Y4G6 2542 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 FAM223BA6NKX1 122 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 SIVA1O15304 175 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 IGHG2P01859 326 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 GTF2H5Q6ZYL4 71 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 FAM223AQ8IWN6 122 aa12.56□□□□□ -0.4
PDAP1-201ENST00000350498 LINC01546A6NGU7 62 aa12.55□□□□□ -0.4
PDAP1-201ENST00000350498 SRSF2Q01130 221 aaKnown RBP12.55□□□□□ -0.4
PDAP1-201ENST00000350498 C9orf47Q6ZRZ4 202 aa12.55□□□□□ -0.4
PDAP1-201ENST00000350498 NHP2Q9NX24 153 aaKnown RBP12.55□□□□□ -0.4
PDAP1-201ENST00000350498 M0R381 172 aa12.54□□□□□ -0.4
PDAP1-201ENST00000350498 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
PDAP1-201ENST00000350498 K7ERU9 68 aa12.54□□□□□ -0.4
PDAP1-201ENST00000350498 DPM2O94777 84 aa12.54□□□□□ -0.4
PDAP1-201ENST00000350498 COTL1Q14019 142 aa12.54□□□□□ -0.4
PDAP1-201ENST00000350498 CREBBPQ92793 2442 aa12.53□□□□□ -0.4
PDAP1-201ENST00000350498 SOCS3O14543 225 aa12.53□□□□□ -0.4
PDAP1-201ENST00000350498 CRIP2P52943 208 aaPredicted RBP12.53□□□□□ -0.4
PDAP1-201ENST00000350498 SAMD5Q5TGI4 173 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms