RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.67□□□□□ -0.7
TRIM4-201ENST00000349062 CHCHD1Q96BP2 118 aaKnown RBP10.67□□□□□ -0.7
TRIM4-201ENST00000349062 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
TRIM4-201ENST00000349062 CACNG7P62955 275 aa10.67□□□□□ -0.7
TRIM4-201ENST00000349062 LOXL1Q08397 574 aaPredicted RBP10.67□□□□□ -0.7
TRIM4-201ENST00000349062 RIGQ13278 110 aa10.67□□□□□ -0.7
TRIM4-201ENST00000349062 ATP5L2Q7Z4Y8 100 aa10.67□□□□□ -0.7
TRIM4-201ENST00000349062 CSTL1Q9H114 145 aa10.67□□□□□ -0.7
TRIM4-201ENST00000349062 A0A1B0GXF2 115 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 EVI2AP22794 236 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 Q96MF0 132 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 NIPBLQ6KC79 2804 aaeCLIP10.66□□□□□ -0.7
TRIM4-201ENST00000349062 NDUFS8O00217 210 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 Q5PR19 223 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 PET117Q6UWS5 81 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 TRBV7-1A0A0A6YYK4 115 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 D6R8Y8 96 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 IGHG4P01861 327 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 FER1L6-AS1Q8NA97 138 aa10.66□□□□□ -0.7
TRIM4-201ENST00000349062 GTF2H5Q6ZYL4 71 aa10.65□□□□□ -0.7
TRIM4-201ENST00000349062 ZNF492Q9P255 531 aa10.65□□□□□ -0.7
TRIM4-201ENST00000349062 DEFB136Q30KP8 78 aa10.65□□□□□ -0.7
TRIM4-201ENST00000349062 LYPD1Q8N2G4 141 aa10.65□□□□□ -0.7
TRIM4-201ENST00000349062 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
TRIM4-201ENST00000349062 TTTY13Q9BZ97 58 aa10.65□□□□□ -0.7
TRIM4-201ENST00000349062 HTN1P15515 57 aa10.65□□□□□ -0.71
TRIM4-201ENST00000349062 GCSHP23434 173 aa10.65□□□□□ -0.71
TRIM4-201ENST00000349062 LINC01356Q8N9X3 169 aa10.65□□□□□ -0.71
TRIM4-201ENST00000349062 PDE6HQ13956 83 aa10.64□□□□□ -0.71
TRIM4-201ENST00000349062 RAB9AP51151 201 aa10.64□□□□□ -0.71
TRIM4-201ENST00000349062 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
TRIM4-201ENST00000349062 NPFFR1Q9GZQ6 430 aa10.64□□□□□ -0.71
TRIM4-201ENST00000349062 FLNBO75369 2602 aaKnown RBP10.64□□□□□ -0.71
TRIM4-201ENST00000349062 PPBPP02775 128 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 GATA1P15976 413 aaPredicted RBP10.63□□□□□ -0.71
TRIM4-201ENST00000349062 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 COX8AP10176 69 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 CKS2P33552 79 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 OR1N2Q8NGR9 330 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 ZNF469Q96JG9 3925 aaPredicted RBP10.63□□□□□ -0.71
TRIM4-201ENST00000349062 A0A0G2JLM5 398 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 A6NDN8 102 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 A6NDX4 124 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 TMEM238C9JI98 176 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 HOXA3O43365 443 aaPredicted RBP10.63□□□□□ -0.71
TRIM4-201ENST00000349062 FCER1GP30273 86 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 ZNF747Q9BV97 191 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 SPCS1Q9Y6A9 102 aa10.63□□□□□ -0.71
TRIM4-201ENST00000349062 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
TRIM4-201ENST00000349062 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
TRIM4-201ENST00000349062 M0R381 172 aa10.62□□□□□ -0.71
TRIM4-201ENST00000349062 RNASE4P34096 147 aaKnown RBP10.62□□□□□ -0.71
TRIM4-201ENST00000349062 H3BVH4 76 aa10.62□□□□□ -0.71
TRIM4-201ENST00000349062 S100A4P26447 101 aaKnown RBP10.62□□□□□ -0.71
TRIM4-201ENST00000349062 C2orf91Q6ZV80 131 aa10.62□□□□□ -0.71
TRIM4-201ENST00000349062 JMJD8Q96S16 334 aa10.62□□□□□ -0.71
TRIM4-201ENST00000349062 TRAV8-2A0A0B4J237 113 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 ZNF688P0C7X2 276 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 SYNJ2BPP57105 145 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 MTURNQ8N3F0 131 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 MS4A6AQ9H2W1 248 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 GCN1Q92616 2671 aaKnown RBP10.61□□□□□ -0.71
TRIM4-201ENST00000349062 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
TRIM4-201ENST00000349062 IGHG2P01859 326 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 BMI1P35226 326 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 SPOCK3Q9BQ16 436 aa10.61□□□□□ -0.71
TRIM4-201ENST00000349062 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
TRIM4-201ENST00000349062 ZNF48Q96MX3 618 aaPredicted RBP10.6□□□□□ -0.71
TRIM4-201ENST00000349062 PRELID3AQ96N28 172 aa10.6□□□□□ -0.71
TRIM4-201ENST00000349062 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
TRIM4-201ENST00000349062 PRSS1P07477 247 aa10.6□□□□□ -0.71
TRIM4-201ENST00000349062 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
TRIM4-201ENST00000349062 GTSF1LQ9H1H1 148 aa10.6□□□□□ -0.71
TRIM4-201ENST00000349062 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 LINC01545Q5VT33 79 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 NPIPB6E9PJ23 425 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 K7ERJ3 54 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 CT83Q5H943 113 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 C18orf65Q6ZTR6 163 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 WFDC11Q8NEX6 87 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 DKK2Q9UBU2 259 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 UNC79Q9P2D8 2635 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 HAX1O00165 279 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 SLC25A16P16260 332 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 SMAGPQ0VAQ4 97 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 PRR9Q5T870 116 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 SLC50A1Q9BRV3 221 aa10.59□□□□□ -0.71
TRIM4-201ENST00000349062 OR10J6PQ8NGY7 276 aa10.58□□□□□ -0.72
TRIM4-201ENST00000349062 SIGLEC8Q9NYZ4 499 aa10.58□□□□□ -0.72
TRIM4-201ENST00000349062 C9orf118A6NHY6 69 aa10.58□□□□□ -0.72
TRIM4-201ENST00000349062 SEC11AP67812 179 aa10.58□□□□□ -0.72
TRIM4-201ENST00000349062 MRPL51Q4U2R6 128 aaKnown RBP10.58□□□□□ -0.72
TRIM4-201ENST00000349062 GFRA4Q9GZZ7 299 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms