RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 F2Z2F3 143 aa13.85□□□□□ -0.19
PTN-201ENST00000348225 APCSP02743 223 aa13.85□□□□□ -0.19
PTN-201ENST00000348225 KIR3DS1Q14943 382 aa13.84□□□□□ -0.19
PTN-201ENST00000348225 KRTAP24-1Q3LI83 254 aa13.84□□□□□ -0.19
PTN-201ENST00000348225 ODF3L2Q3SX64 289 aa13.84□□□□□ -0.19
PTN-201ENST00000348225 AMTNQ6UX39 209 aa13.84□□□□□ -0.19
PTN-201ENST00000348225 NDUFA6P56556 154 aa13.83□□□□□ -0.2
PTN-201ENST00000348225 SPINK13Q1W4C9 94 aa13.83□□□□□ -0.2
PTN-201ENST00000348225 Q6ZQT7 251 aa13.83□□□□□ -0.2
PTN-201ENST00000348225 ZNF575Q86XF7 245 aa13.83□□□□□ -0.2
PTN-201ENST00000348225 JMJD1CQ15652 2540 aa13.83□□□□□ -0.2
PTN-201ENST00000348225 M0R2Z0 102 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 INSL3P51460 131 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 SNRPEP62304 92 aaKnown RBP13.82□□□□□ -0.2
PTN-201ENST00000348225 GFI1BQ5VTD9 330 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 TRAV12-3A0A0B4J271 114 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 C5orf52A6NGY3 159 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 ZNF124Q15973 351 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 ANXA2RQ3ZCQ2 193 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 FAM159AQ6UWV7 190 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 GATD1Q8NB37 220 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 KCNS1Q96KK3 526 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 CLUHP3Q96NS8 147 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 FAM110AQ9BQ89 295 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 CNFNQ9BYD5 112 aa13.82□□□□□ -0.2
PTN-201ENST00000348225 TEP1Q99973 2627 aaKnown RBP13.81□□□□□ -0.2
PTN-201ENST00000348225 ASIPP42127 132 aa13.81□□□□□ -0.2
PTN-201ENST00000348225 SLAQ13239 276 aa13.81□□□□□ -0.2
PTN-201ENST00000348225 BEAN1Q3B7T3 259 aa13.81□□□□□ -0.2
PTN-201ENST00000348225 MUC21Q5SSG8 566 aa13.81□□□□□ -0.2
PTN-201ENST00000348225 C9orf66Q5T8R8 295 aa13.81□□□□□ -0.2
PTN-201ENST00000348225 SORL1Q92673 2214 aa13.8□□□□□ -0.2
PTN-201ENST00000348225 TRAV12-2A0A075B6T6 113 aa13.8□□□□□ -0.2
PTN-201ENST00000348225 STHQ8IWL8 128 aa13.8□□□□□ -0.2
PTN-201ENST00000348225 SSBP4Q9BWG4 385 aaPredicted RBP13.8□□□□□ -0.2
PTN-201ENST00000348225 AGRNO00468 2067 aa13.8□□□□□ -0.2
PTN-201ENST00000348225 ZNF324O75467 553 aaPredicted RBP13.79□□□□□ -0.2
PTN-201ENST00000348225 OR5AL1P0C617 328 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 MED14OSP0DP75 135 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 S100A4P26447 101 aaKnown RBP13.79□□□□□ -0.2
PTN-201ENST00000348225 TWIST1Q15672 202 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 SNAI2O43623 268 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 CACNG7P62955 275 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 DNLZQ5SXM8 178 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 ZNF747Q9BV97 191 aa13.79□□□□□ -0.2
PTN-201ENST00000348225 RBMY1BA6NDE4 496 aaKnown RBP13.78□□□□□ -0.2
PTN-201ENST00000348225 RBMY1EA6NEQ0 496 aaKnown RBP13.78□□□□□ -0.2
PTN-201ENST00000348225 H3BVH4 76 aa13.78□□□□□ -0.2
PTN-201ENST00000348225 UBE2CO00762 179 aa13.78□□□□□ -0.2
PTN-201ENST00000348225 RBMY1DP0C7P1 496 aaKnown RBP13.78□□□□□ -0.2
PTN-201ENST00000348225 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
PTN-201ENST00000348225 TDRG1Q3Y452 100 aa13.78□□□□□ -0.2
PTN-201ENST00000348225 ZNF493Q6ZR52 646 aa13.78□□□□□ -0.2
PTN-201ENST00000348225 MCRIP2Q9BUT9 160 aaKnown RBP13.78□□□□□ -0.2
PTN-201ENST00000348225 MUC21A0A0G2JKD1 596 aa13.77□□□□□ -0.21
PTN-201ENST00000348225 MUC21A0A140T8X8 626 aa13.77□□□□□ -0.21
PTN-201ENST00000348225 AMBPP02760 352 aa13.77□□□□□ -0.21
PTN-201ENST00000348225 NTF3P20783 257 aa13.77□□□□□ -0.21
PTN-201ENST00000348225 SSTP61278 116 aa13.77□□□□□ -0.21
PTN-201ENST00000348225 HOXA5P20719 270 aa13.76□□□□□ -0.21
PTN-201ENST00000348225 SRIP30626 198 aa13.76□□□□□ -0.21
PTN-201ENST00000348225 FXYD7P58549 80 aa13.76□□□□□ -0.21
PTN-201ENST00000348225 COA6Q5JTJ3 125 aaKnown RBP13.76□□□□□ -0.21
PTN-201ENST00000348225 PRIMA1Q86XR5 153 aa13.76□□□□□ -0.21
PTN-201ENST00000348225 IGHV1OR15-1A0A075B7D0 117 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 CD7P09564 240 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 SPANXN1Q5VSR9 72 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 TRPT1Q86TN4 253 aaKnown RBP13.75□□□□□ -0.21
PTN-201ENST00000348225 ATRQ13535 2644 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 IGHV4-4A0A075B6R2 117 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 LOC102724200A0A096LPH7 203 aaPredicted RBP13.75□□□□□ -0.21
PTN-201ENST00000348225 CRXO43186 299 aaPredicted RBP13.75□□□□□ -0.21
PTN-201ENST00000348225 GNRH2O43555 120 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 NUTF2P61970 127 aaKnown RBP13.75□□□□□ -0.21
PTN-201ENST00000348225 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 OR10AG1Q8NH19 301 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 C20orf144Q9BQM9 153 aa13.75□□□□□ -0.21
PTN-201ENST00000348225 TIMM8BQ9Y5J9 83 aaPredicted RBP13.75□□□□□ -0.21
PTN-201ENST00000348225 TENM1Q9UKZ4 2725 aa13.74□□□□□ -0.21
PTN-201ENST00000348225 INSP01308 110 aa13.74□□□□□ -0.21
PTN-201ENST00000348225 Q0VG73 95 aa13.74□□□□□ -0.21
PTN-201ENST00000348225 OR10J3Q5JRS4 329 aa13.74□□□□□ -0.21
PTN-201ENST00000348225 SMIM15Q7Z3B0 74 aa13.74□□□□□ -0.21
PTN-201ENST00000348225 TMEM191AQ9H0A3 160 aa13.74□□□□□ -0.21
PTN-201ENST00000348225 PHLDA3Q9Y5J5 127 aa13.74□□□□□ -0.21
PTN-201ENST00000348225 TMEM158Q8WZ71 300 aa13.73□□□□□ -0.21
PTN-201ENST00000348225 SCRT2Q9NQ03 307 aa13.73□□□□□ -0.21
PTN-201ENST00000348225 C19orf73Q9NVV2 129 aa13.73□□□□□ -0.21
PTN-201ENST00000348225 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 RNASE3P12724 160 aaKnown RBP13.72□□□□□ -0.21
PTN-201ENST00000348225 FAM104BQ5XKR9 115 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 SHISA2Q6UWI4 295 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 C12orf54Q6X4T0 127 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 GTSCR1Q86UQ5 136 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
PTN-201ENST00000348225 PRR31Q5SQ13 230 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 BAGE3Q86Y29 109 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 SPATA3Q8NHX4 192 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms