RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 K7EQM0 130 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 PRB1P04280 392 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 CT45A10P0DMU9 189 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 JMJD8Q96S16 334 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 CITED1Q99966 193 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 CNFNQ9BYD5 112 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 ST20Q9HBF5 79 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 TLN2Q9Y4G6 2542 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 CSN1S1P47710 185 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 FA2HQ7L5A8 372 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 NRACQ8N912 160 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 PTPN13Q12923 2485 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 SOCS3O14543 225 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 COX8AP10176 69 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 LINC01559Q495D7 138 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 SLC25A34Q6PIV7 304 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 TMEM191AQ9H0A3 160 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 THYN1Q9P016 225 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 FAM208BQ5VWN6 2430 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 FBLL1A6NHQ2 334 aaKnown RBP4.57□□□□□ -1.68
CLCN3-201ENST00000347613 FABP5P3A8MUU1 101 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 GNRH2O43555 120 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 UCNP55089 124 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 AMMECR1LQ6DCA0 310 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 TRAV41A0A0B4J266 112 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 TRAV25A0A0B4J276 109 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 OOSP1A8MZH6 123 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 LEPP41159 167 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 UBE2V1Q13404 147 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 DEFB125Q8N687 156 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 ZFAND2AQ8N6M9 145 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 ORAOV1Q8WV07 137 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 JPT2Q9H910 190 aa4.57□□□□□ -1.68
CLCN3-201ENST00000347613 PEF1Q9UBV8 284 aaKnown RBP4.57□□□□□ -1.68
CLCN3-201ENST00000347613 PDZD2O15018 2839 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 ADAMTSL5Q6ZMM2 481 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 MAPKAPK5-AS1Q8N8E1 139 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 RPL39LQ96EH5 51 aaKnown RBP4.56□□□□□ -1.68
CLCN3-201ENST00000347613 HSPB8Q9UJY1 196 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 IGHV1-69DA0A0B4J2H0 117 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 LINC01546A6NGU7 62 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 H3BUX3 64 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 H3BVH4 76 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 WIPF1O43516 503 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 CD5LO43866 347 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 IGHV1-69P01742 117 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 NEGR1Q7Z3B1 354 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 OR2K2Q8NGT1 345 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 TMEM158Q8WZ71 300 aa4.56□□□□□ -1.68
CLCN3-201ENST00000347613 BBC3Q96PG8 261 aaPredicted RBP4.56□□□□□ -1.68
CLCN3-201ENST00000347613 PRM2P04554 102 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 ZC2HC1BQ5TFG8 222 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 IFI27L1Q96BM0 104 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 VWFP04275 2813 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 SETD2Q9BYW2 2564 aaPredicted RBP4.55□□□□□ -1.68
CLCN3-201ENST00000347613 C20orf202A1L168 122 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 HBDP02042 147 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 ATP5G2Q06055 141 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 C9orf47Q6ZRZ4 202 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 BOD1L2Q8IYS8 172 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 VCX2Q9H322 139 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 ITPR2Q14571 2701 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 Q6AWC8 147 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 GTSCR1Q86UQ5 136 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 C10orf105Q8TEF2 133 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 ZMAT4Q9H898 229 aa4.55□□□□□ -1.68
CLCN3-201ENST00000347613 ARL3P36405 182 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 LGALS9BQ3B8N2 356 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 OXLD1Q5BKU9 147 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 LGALS9CQ6DKI2 356 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 ZNF738Q8NE65 137 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 EEF1AKMT3Q96AZ1 226 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 SMPXQ9UHP9 88 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 MYO9AB2RTY4 2548 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 A0A1B0GW15 77 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 RNASE3P12724 160 aaKnown RBP4.54□□□□□ -1.68
CLCN3-201ENST00000347613 NMUP48645 174 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 RASL10AQ92737 203 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 C16orf92Q96LL3 132 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 FAM19A4Q96LR4 140 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 CR1P17927 2039 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 TRBV7-1A0A0A6YYK4 115 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 K7ERJ3 54 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 SRSF1Q07955 248 aaKnown RBP eCLIP4.54□□□□□ -1.68
CLCN3-201ENST00000347613 ANXA2RQ3ZCQ2 193 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 C14orf178Q8N769 122 aaPredicted RBP4.54□□□□□ -1.68
CLCN3-201ENST00000347613 METTL26Q96S19 204 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 MEGF9Q9H1U4 602 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 MOB4Q9Y3A3 225 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 UFC1Q9Y3C8 167 aa4.54□□□□□ -1.68
CLCN3-201ENST00000347613 SONP18583 2426 aaKnown RBP4.54□□□□□ -1.68
CLCN3-201ENST00000347613 RBAKDNA6NC62 111 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 A6NDX4 124 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 M0R381 172 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 SRSF2Q01130 221 aaKnown RBP4.53□□□□□ -1.68
CLCN3-201ENST00000347613 CFHR3Q02985 330 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 C18orf65Q6ZTR6 163 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 RAB37Q96AX2 223 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 MS4A6AQ9H2W1 248 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms