RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ALPK2Q86TB3 2170 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 HSD17B10Q99714 261 aaKnown RBP5.64□□□□□ -1.51
ZNF540-202ENST00000343599 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 PIGLQ9Y2B2 252 aa5.64□□□□□ -1.51
ZNF540-202ENST00000343599 IGKV1-27A0A075B6S5 117 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 LINC00694P0DN24 101 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 C12orf74Q32Q52 190 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 SBSPONQ8IVN8 264 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 OR51H1Q8NH63 302 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 UBE2E2Q96LR5 201 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 IL36RNQ9UBH0 155 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 LAMA5O15230 3695 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 FLNAP21333 2647 aaKnown RBP5.63□□□□□ -1.51
ZNF540-202ENST00000343599 IGLV2-14P01704 120 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 HLA-DRB4P13762 266 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 RBM11P57052 281 aaKnown RBP5.63□□□□□ -1.51
ZNF540-202ENST00000343599 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
ZNF540-202ENST00000343599 FAM19A5Q7Z5A7 132 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-202ENST00000343599 ABHD12Q8N2K0 398 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 MUC7Q8TAX7 377 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 HLA-DRB4X5D2U9 266 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 HIVEP2P31629 2446 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 IGKV1-12A0A0C4DH73 117 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 J3KT08 172 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 SNCGO76070 127 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 IGKV1D-12P01611 117 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 FOXA3P55318 350 aaPredicted RBP5.63□□□□□ -1.51
ZNF540-202ENST00000343599 H2BFWTQ7Z2G1 175 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 NPBQ8NG41 125 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 OR10J6PQ8NGY7 276 aa5.63□□□□□ -1.51
ZNF540-202ENST00000343599 TRAV4A0A0B4J268 109 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 CSN1S1P47710 185 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 RPL30P62888 115 aaKnown RBP5.62□□□□□ -1.51
ZNF540-202ENST00000343599 FGFRL1Q8N441 504 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 MAPK1IP1LQ8NDC0 245 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 PIGCQ92535 297 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
ZNF540-202ENST00000343599 RITA1Q96K30 269 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 RASL11BQ9BPW5 248 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 FBXL15Q9H469 300 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 F11RQ9Y624 299 aaKnown RBP5.62□□□□□ -1.51
ZNF540-202ENST00000343599 TRBV6-6A0A0A6YYG2 114 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 HIGD1CA8MV81 97 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 M0R135 149 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 IGLV1-40P01703 118 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 PPP1R27Q86WC6 154 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 DLX4Q92988 240 aaPredicted RBP5.62□□□□□ -1.51
ZNF540-202ENST00000343599 ZNF355PQ9NSJ1 428 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 SPANXCQ9NY87 97 aa5.62□□□□□ -1.51
ZNF540-202ENST00000343599 C15orf62A8K5M9 175 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 GGTLC3B5MD39 225 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 CCL24O00175 119 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 SPRY2O43597 315 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 CCL8P80075 99 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 OR13C6PQ8NH95 151 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 BAALCQ8WXS3 180 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 CCL17Q92583 94 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 TMEM101Q96IK0 257 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 MGST2Q99735 147 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 IFI27L2Q9H2X8 130 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 LOC400499M0QZD8 3231 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 C9JAW5 83 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 F5H768 121 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 CRYGBP07316 175 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 NMUP48645 174 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 MKXQ8IYA7 352 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 KIR2DL5BQ8NHK3 375 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 TMEM167BQ9NRX6 74 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 HIGD1AQ9Y241 93 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 KLF12Q9Y4X4 402 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 LOC107984640A0A0U1RRK4 108 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 SPRY3O43610 288 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 LTAP01374 205 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 OR1L4Q8NGR5 311 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 OR1L8Q8NGR8 309 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 COQ2Q96H96 371 aa5.61□□□□□ -1.51
ZNF540-202ENST00000343599 MALRD1Q5VYJ5 2156 aa5.6□□□□□ -1.51
ZNF540-202ENST00000343599 A0A096LNJ9 63 aa5.6□□□□□ -1.51
ZNF540-202ENST00000343599 ZNF138P52744 262 aa5.6□□□□□ -1.51
ZNF540-202ENST00000343599 EDA2RQ9HAV5 297 aa5.6□□□□□ -1.51
ZNF540-202ENST00000343599 TEP1Q99973 2627 aaKnown RBP5.6□□□□□ -1.51
ZNF540-202ENST00000343599 TRBV25-1A0A075B6N4 114 aa5.6□□□□□ -1.51
ZNF540-202ENST00000343599 SAA4P35542 130 aa5.6□□□□□ -1.51
ZNF540-202ENST00000343599 LGALS9O00182 355 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 CHEK1O14757 476 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 NDUFA3O95167 84 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 MIC13Q5XKP0 118 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 MORN3Q6PF18 240 aaPredicted RBP5.59□□□□□ -1.51
ZNF540-202ENST00000343599 MOB3BQ86TA1 216 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 ENY2Q9NPA8 101 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 C21orf62Q9NYP8 219 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 DPM3Q9P2X0 92 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 LINC01619G3V211 115 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 IGHV4-59P01825 116 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 OR13A1Q8NGR1 328 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 ZNRF2Q8NHG8 242 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 GFRA4Q9GZZ7 299 aa5.59□□□□□ -1.51
ZNF540-202ENST00000343599 DUSP14O95147 198 aaKnown RBP5.59□□□□□ -1.52
ZNF540-202ENST00000343599 APOHP02749 345 aaPredicted RBP5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms