RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 GCSHP23434 173 aa8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 RPL12P30050 165 aaKnown RBP8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 FUSP35637 526 aaKnown RBP eCLIP8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 XGP55808 180 aa8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 NHLRC2Q8NBF2 726 aa8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 SDF2L1Q9HCN8 221 aa8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 TREM1Q9NP99 234 aa8.85□□□□□ -0.99
NECTIN1-203ENST00000341398 TRAV8-6A0A0B4J262 113 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 GNRH2O43555 120 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 SSNA1O43805 119 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 UPK1BO75841 260 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 MPC2O95563 127 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 PFN1P07737 140 aaKnown RBP8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 PPT1P50897 306 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 TIRAPP58753 221 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 NDFIP1Q9BT67 221 aa8.84□□□□□ -0.99
NECTIN1-203ENST00000341398 IGHV3-16A0A0C4DH30 117 aa8.83□□□□□ -1
NECTIN1-203ENST00000341398 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
NECTIN1-203ENST00000341398 GOLT1AQ6ZVE7 132 aa8.83□□□□□ -1
NECTIN1-203ENST00000341398 PRADC1Q9BSG0 188 aa8.83□□□□□ -1
NECTIN1-203ENST00000341398 SMIM3Q9BZL3 60 aa8.83□□□□□ -1
NECTIN1-203ENST00000341398 SERTM2A0A1B0GWG4 89 aa8.82□□□□□ -1
NECTIN1-203ENST00000341398 FBLL1A6NHQ2 334 aaKnown RBP8.82□□□□□ -1
NECTIN1-203ENST00000341398 FAM229AH3BQW9 127 aa8.82□□□□□ -1
NECTIN1-203ENST00000341398 K7EQM0 130 aa8.82□□□□□ -1
NECTIN1-203ENST00000341398 H2BFSP57053 126 aa8.82□□□□□ -1
NECTIN1-203ENST00000341398 KRTAP10-1P60331 282 aa8.82□□□□□ -1
NECTIN1-203ENST00000341398 Q5VSD8 79 aa8.82□□□□□ -1
NECTIN1-203ENST00000341398 ASB13Q8WXK3 278 aa8.82□□□□□ -1
NECTIN1-203ENST00000341398 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
NECTIN1-203ENST00000341398 TYMSP04818 313 aa8.81□□□□□ -1
NECTIN1-203ENST00000341398 GATA1P15976 413 aaPredicted RBP8.81□□□□□ -1
NECTIN1-203ENST00000341398 ZNF876PQ49A33 203 aa8.81□□□□□ -1
NECTIN1-203ENST00000341398 OR10J3Q5JRS4 329 aa8.81□□□□□ -1
NECTIN1-203ENST00000341398 NTN5Q8WTR8 489 aaPredicted RBP8.81□□□□□ -1
NECTIN1-203ENST00000341398 MARVELD1Q9BSK0 173 aa8.81□□□□□ -1
NECTIN1-203ENST00000341398 SH3BGRL3Q9H299 93 aa8.81□□□□□ -1
NECTIN1-203ENST00000341398 UBR4Q5T4S7 5183 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 LOC100131303A0A0U1RQF7 123 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 F6UZH7 168 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 TAAR5O14804 337 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 DEFA1P59665 94 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 DEFA3P59666 94 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 LINC01556Q5JQF7 62 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 OR10G9Q8NGN4 311 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 OR10G7Q8NGN6 311 aa8.8□□□□□ -1
NECTIN1-203ENST00000341398 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
NECTIN1-203ENST00000341398 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
NECTIN1-203ENST00000341398 RHOHQ15669 191 aa8.79□□□□□ -1
NECTIN1-203ENST00000341398 SLC25A29Q8N8R3 303 aa8.79□□□□□ -1
NECTIN1-203ENST00000341398 TRAV8-1A0A0A6YYK1 113 aa8.78□□□□□ -1
NECTIN1-203ENST00000341398 ZFP69Q49AA0 526 aa8.78□□□□□ -1
NECTIN1-203ENST00000341398 TVP23CQ96ET8 276 aa8.78□□□□□ -1
NECTIN1-203ENST00000341398 TMEM70Q9BUB7 260 aa8.78□□□□□ -1
NECTIN1-203ENST00000341398 TM2D2Q9BX73 214 aa8.78□□□□□ -1
NECTIN1-203ENST00000341398 RS1O15537 224 aa8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 EIF3GO75821 320 aaKnown RBP eCLIP8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 CDC34P49427 236 aaPredicted RBP8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 RAB2AP61019 212 aa8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 LELP1Q5T871 98 aa8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 Q9HAA7 133 aa8.77□□□□□ -1.01
NECTIN1-203ENST00000341398 HMGB3O15347 200 aaKnown RBP8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 MBP02144 154 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 ARL14EPLP0DKL9 152 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 MGST1P10620 155 aaKnown RBP8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 GNG5P63218 68 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 SMUG1Q53HV7 270 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 ATP6V0E2Q8NHE4 81 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 PTH2Q96A98 100 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 SGK494Q96LW2 274 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 WFDC1Q9HC57 220 aa8.76□□□□□ -1.01
NECTIN1-203ENST00000341398 LRCOL1A6NCL2 159 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 GCGP01275 180 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 IGHV3-33P01772 117 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 TCRAP04437 139 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 STAG3L2P0CL84 134 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 STAG3L3P0CL85 134 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 IFITM3Q01628 133 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 SAPCD1Q5SSQ6 148 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 Q8N814 137 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 TMEM167BQ9NRX6 74 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 PSG8Q9UQ74 426 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 VPS13BQ7Z7G8 4022 aa8.75□□□□□ -1.01
NECTIN1-203ENST00000341398 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 SUMO1P63165 101 aaKnown RBP8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 SERF2P84101 59 aa8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 FLI1Q01543 452 aaPredicted RBP8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 LAGE3Q14657 143 aa8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 Q6ZSN1 163 aa8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 OR2G3Q8NGZ4 309 aa8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 RAB24Q969Q5 203 aa8.74□□□□□ -1.01
NECTIN1-203ENST00000341398 PGPEP1LA6NFU8 196 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms