RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 HIGD1AQ9Y241 93 aa12.47□□□□□ -0.41
IFT27-201ENST00000340630 H3BRN7 92 aa12.46□□□□□ -0.41
IFT27-201ENST00000340630 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
IFT27-201ENST00000340630 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
IFT27-201ENST00000340630 RNASE8Q8TDE3 154 aaKnown RBP12.46□□□□□ -0.41
IFT27-201ENST00000340630 FXYD5Q96DB9 178 aa12.46□□□□□ -0.41
IFT27-201ENST00000340630 PAXXQ9BUH6 204 aa12.46□□□□□ -0.41
IFT27-201ENST00000340630 SMCO4Q9NRQ5 59 aa12.46□□□□□ -0.41
IFT27-201ENST00000340630 NAT8Q9UHE5 227 aa12.46□□□□□ -0.41
IFT27-201ENST00000340630 SCO2A0A1W2PP80 73 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 A0A1W2PRE2 83 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 OR10J4P0C629 311 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 PYYP10082 97 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 RPL7P18124 248 aaKnown RBP12.45□□□□□ -0.42
IFT27-201ENST00000340630 PSG3Q16557 428 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 ZNF674Q2M3X9 581 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 TMEM263Q8WUH6 116 aaKnown RBP12.45□□□□□ -0.42
IFT27-201ENST00000340630 UPK3BQ9BT76 320 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 SHANK2-AS3Q9BTD1 123 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 ZNF586Q9NXT0 402 aa12.45□□□□□ -0.42
IFT27-201ENST00000340630 A0A087WWC5 75 aa12.44□□□□□ -0.42
IFT27-201ENST00000340630 A0A1W2PPQ1 181 aa12.44□□□□□ -0.42
IFT27-201ENST00000340630 B4DEV8 164 aa12.44□□□□□ -0.42
IFT27-201ENST00000340630 CDKN1BP46527 198 aa12.44□□□□□ -0.42
IFT27-201ENST00000340630 TMEM241Q24JQ0 296 aa12.44□□□□□ -0.42
IFT27-201ENST00000340630 TMA7Q9Y2S6 64 aaKnown RBP12.44□□□□□ -0.42
IFT27-201ENST00000340630 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 GGTLC3B5MD39 225 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 H7BYZ3 331 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 GAGE7O76087 117 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 INAFM2P0DMQ5 153 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 HOXA5P20719 270 aa12.43□□□□□ -0.42
IFT27-201ENST00000340630 MRPS16Q9Y3D3 137 aaKnown RBP12.43□□□□□ -0.42
IFT27-201ENST00000340630 DMBT1Q9UGM3 2413 aaPredicted RBP12.42□□□□□ -0.42
IFT27-201ENST00000340630 NDUFB4O95168 129 aa12.42□□□□□ -0.42
IFT27-201ENST00000340630 RPL23P62829 140 aaKnown RBP12.42□□□□□ -0.42
IFT27-201ENST00000340630 KIR3DS1Q14943 382 aa12.42□□□□□ -0.42
IFT27-201ENST00000340630 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
IFT27-201ENST00000340630 TMEM14CQ9P0S9 112 aa12.42□□□□□ -0.42
IFT27-201ENST00000340630 A0A087X0K7 114 aa12.41□□□□□ -0.42
IFT27-201ENST00000340630 FUSP35637 526 aaKnown RBP eCLIP12.41□□□□□ -0.42
IFT27-201ENST00000340630 LINC00612Q8N6U2 182 aa12.41□□□□□ -0.42
IFT27-201ENST00000340630 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
IFT27-201ENST00000340630 VPS13BQ7Z7G8 4022 aa12.4□□□□□ -0.42
IFT27-201ENST00000340630 COLCA2A8K830 154 aa12.4□□□□□ -0.42
IFT27-201ENST00000340630 LINC00315P59091 139 aa12.4□□□□□ -0.42
IFT27-201ENST00000340630 YPEL4Q96NS1 127 aa12.4□□□□□ -0.42
IFT27-201ENST00000340630 TRBV20OR9-2A0A075B6H5 130 aa12.39□□□□□ -0.43
IFT27-201ENST00000340630 SNRPCP09234 159 aaKnown RBP12.39□□□□□ -0.43
IFT27-201ENST00000340630 SUMO1P63165 101 aaKnown RBP12.39□□□□□ -0.43
IFT27-201ENST00000340630 ADIRFQ15847 76 aa12.39□□□□□ -0.43
IFT27-201ENST00000340630 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
IFT27-201ENST00000340630 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
IFT27-201ENST00000340630 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 C9JCJ5 164 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 H3BNG1 76 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 MRPS12O15235 138 aaKnown RBP12.38□□□□□ -0.43
IFT27-201ENST00000340630 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 S100A7AQ86SG5 101 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 LINC01551Q86U37 167 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 LYPD1Q8N2G4 141 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 ISOC2Q96AB3 205 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 CTDSP1Q9GZU7 261 aa12.38□□□□□ -0.43
IFT27-201ENST00000340630 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
IFT27-201ENST00000340630 Q6ZRN7 208 aaPredicted RBP12.37□□□□□ -0.43
IFT27-201ENST00000340630 HIST1H2BAQ96A08 127 aa12.37□□□□□ -0.43
IFT27-201ENST00000340630 TCEAL7Q9BRU2 100 aa12.37□□□□□ -0.43
IFT27-201ENST00000340630 TMEM242Q9NWH2 141 aa12.37□□□□□ -0.43
IFT27-201ENST00000340630 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
IFT27-201ENST00000340630 MYCBP2O75592 4640 aa12.37□□□□□ -0.43
IFT27-201ENST00000340630 PRAC2D3DTV9 90 aa12.36□□□□□ -0.43
IFT27-201ENST00000340630 J3KRW8 73 aa12.36□□□□□ -0.43
IFT27-201ENST00000340630 EREGO14944 169 aa12.36□□□□□ -0.43
IFT27-201ENST00000340630 RPL35P42766 123 aaKnown RBP12.36□□□□□ -0.43
IFT27-201ENST00000340630 XGP55808 180 aa12.36□□□□□ -0.43
IFT27-201ENST00000340630 BLNKQ8WV28 456 aa12.36□□□□□ -0.43
IFT27-201ENST00000340630 ZNF331Q9NQX6 463 aaPredicted RBP12.36□□□□□ -0.43
IFT27-201ENST00000340630 A0A096LPF7 62 aa12.35□□□□□ -0.43
IFT27-201ENST00000340630 IGLC2P0DOY2 106 aa12.35□□□□□ -0.43
IFT27-201ENST00000340630 Q6ZTI0 123 aa12.35□□□□□ -0.43
IFT27-201ENST00000340630 BPIFA4PQ86YQ2 179 aa12.35□□□□□ -0.43
IFT27-201ENST00000340630 VSIG2Q96IQ7 327 aa12.35□□□□□ -0.43
IFT27-201ENST00000340630 PRELID1Q9Y255 219 aa12.35□□□□□ -0.43
IFT27-201ENST00000340630 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 PGPEP1LA6NFU8 196 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 H3BTX0 84 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 PEX7O00628 323 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 SIVA1O15304 175 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 MT-ND4LP03901 98 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 RANP62826 216 aaKnown RBP12.34□□□□□ -0.43
IFT27-201ENST00000340630 Q5VSD8 79 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 ANAPC16Q96DE5 110 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 SLC50A1Q9BRV3 221 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 RNF24Q9Y225 148 aa12.34□□□□□ -0.43
IFT27-201ENST00000340630 TRBV19A0A075B6N1 114 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms