RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 LY6G6CO95867 125 aa10.76□□□□□ -0.69
UBE3B-201ENST00000340074 ATP5G1P05496 136 aa10.76□□□□□ -0.69
UBE3B-201ENST00000340074 PFN1P07737 140 aaKnown RBP10.76□□□□□ -0.69
UBE3B-201ENST00000340074 AKR1C3P42330 323 aa10.76□□□□□ -0.69
UBE3B-201ENST00000340074 DNAH1Q9P2D7 4330 aa10.76□□□□□ -0.69
UBE3B-201ENST00000340074 MUC4Q99102 2169 aa10.76□□□□□ -0.69
UBE3B-201ENST00000340074 TRGV11A0A075B6L2 103 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 TRGV1A0A0A0MS02 117 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 GNRH2O43555 120 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 SPINK4O60575 86 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 NDUFAF3Q9BU61 184 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 F5H768 121 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 TYMSP04818 313 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 TMEM88Q6PEY1 159 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 FAM210BQ96KR6 192 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 SDF2L1Q9HCN8 221 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 ZFP30Q9Y2G7 519 aa10.75□□□□□ -0.69
UBE3B-201ENST00000340074 TRBV6-1A0A0K0K1D8 114 aa10.74□□□□□ -0.69
UBE3B-201ENST00000340074 LTAP01374 205 aa10.74□□□□□ -0.69
UBE3B-201ENST00000340074 LGALS9BQ3B8N2 356 aa10.74□□□□□ -0.69
UBE3B-201ENST00000340074 LGALS9CQ6DKI2 356 aa10.74□□□□□ -0.69
UBE3B-201ENST00000340074 ZC2HC1AQ96GY0 325 aa10.74□□□□□ -0.69
UBE3B-201ENST00000340074 MRPL16Q9NX20 251 aaKnown RBP10.74□□□□□ -0.69
UBE3B-201ENST00000340074 NACAE9PAV3 2078 aa10.73□□□□□ -0.69
UBE3B-201ENST00000340074 TRGV2A0A075B6R0 118 aa10.73□□□□□ -0.69
UBE3B-201ENST00000340074 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
UBE3B-201ENST00000340074 HYDINQ4G0P3 5121 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 FABP5P3A8MUU1 101 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 S100A9P06702 114 aaKnown RBP10.72□□□□□ -0.69
UBE3B-201ENST00000340074 CRIP1P50238 77 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 COX8CQ7Z4L0 72 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 C18orf15Q96N68 181 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 SPXQ9BT56 116 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 RYR2Q92736 4967 aa10.72□□□□□ -0.69
UBE3B-201ENST00000340074 IFNA1P01562 189 aa10.71□□□□□ -0.69
UBE3B-201ENST00000340074 HOXA5P20719 270 aa10.71□□□□□ -0.69
UBE3B-201ENST00000340074 BLOC1S1P78537 153 aa10.71□□□□□ -0.69
UBE3B-201ENST00000340074 MEF2BQ02080 365 aaPredicted RBP10.71□□□□□ -0.69
UBE3B-201ENST00000340074 OR5I1Q13606 314 aa10.71□□□□□ -0.69
UBE3B-201ENST00000340074 TXNDC17Q9BRA2 123 aa10.71□□□□□ -0.69
UBE3B-201ENST00000340074 IGKV3D-20A0A0C4DH25 116 aa10.7□□□□□ -0.7
UBE3B-201ENST00000340074 BCL2P10415 239 aa10.7□□□□□ -0.7
UBE3B-201ENST00000340074 C11orf52Q96A22 123 aa10.7□□□□□ -0.7
UBE3B-201ENST00000340074 DERL1Q9BUN8 251 aa10.7□□□□□ -0.7
UBE3B-201ENST00000340074 VPS13DQ5THJ4 4388 aa10.7□□□□□ -0.7
UBE3B-201ENST00000340074 KMT2AQ03164 3969 aa10.69□□□□□ -0.7
UBE3B-201ENST00000340074 SH2D1AO60880 128 aa10.69□□□□□ -0.7
UBE3B-201ENST00000340074 RPL35P42766 123 aaKnown RBP10.69□□□□□ -0.7
UBE3B-201ENST00000340074 ZNF674Q2M3X9 581 aa10.69□□□□□ -0.7
UBE3B-201ENST00000340074 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
UBE3B-201ENST00000340074 BAGE2Q86Y30 109 aa10.69□□□□□ -0.7
UBE3B-201ENST00000340074 TRAV26-1A0A087WT03 109 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 M0R2P5 195 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 PDE6DO43924 150 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 IGHV3-53P01767 116 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 ORM1P02763 201 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 RASL10AQ92737 203 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 VAX2Q9UIW0 290 aa10.68□□□□□ -0.7
UBE3B-201ENST00000340074 M0R036 132 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 P0DMU3 169 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 FAM231AP0DMU4 169 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 FAM231CP0DMU5 169 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 RNASE3P12724 160 aaKnown RBP10.67□□□□□ -0.7
UBE3B-201ENST00000340074 LYPD6BQ8NI32 183 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 C9orf85Q96MD7 179 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 A0A0J9YY99 117 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 B4DEV8 164 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 KRBOX1C9JBD0 128 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 NUDT3O95989 172 aa10.67□□□□□ -0.7
UBE3B-201ENST00000340074 TAGLN2P37802 199 aaKnown RBP10.67□□□□□ -0.7
UBE3B-201ENST00000340074 SFTA3P0C7M3 94 aa10.66□□□□□ -0.7
UBE3B-201ENST00000340074 POM121L12Q8N7R1 296 aa10.66□□□□□ -0.7
UBE3B-201ENST00000340074 MED9Q9NWA0 146 aa10.66□□□□□ -0.7
UBE3B-201ENST00000340074 RAB19A4D1S5 217 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 C9JCJ5 164 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 S100A4P26447 101 aaKnown RBP10.65□□□□□ -0.7
UBE3B-201ENST00000340074 ASIPP42127 132 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 ZNF876PQ49A33 203 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 CENPWQ5EE01 88 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 PRR27Q6MZM9 219 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 ZNF575Q86XF7 245 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 VSIG2Q96IQ7 327 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 ZNF479Q96JC4 524 aa10.65□□□□□ -0.7
UBE3B-201ENST00000340074 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
UBE3B-201ENST00000340074 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
UBE3B-201ENST00000340074 GRIFINA4D1Z8 144 aa10.64□□□□□ -0.71
UBE3B-201ENST00000340074 RBFOX3A6NFN3 312 aa10.64□□□□□ -0.71
UBE3B-201ENST00000340074 FHL2Q14192 279 aa10.64□□□□□ -0.71
UBE3B-201ENST00000340074 LINC01559Q495D7 138 aa10.64□□□□□ -0.71
UBE3B-201ENST00000340074 TEX261Q6UWH6 196 aa10.64□□□□□ -0.71
UBE3B-201ENST00000340074 TRGV4A0A0C4DH28 118 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 PGPEP1LA6NFU8 196 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 H3BNG1 76 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 H3BVH4 76 aa10.63□□□□□ -0.71
UBE3B-201ENST00000340074 GNG4P50150 75 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms