RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 OR11H6Q8NGC7 330 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 CFHR4Q92496 578 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 AGPAT4-IT1Q9H0P7 198 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 SS18L2Q9UHA2 77 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 FAM215AQ9Y5M1 114 aa11.05□□□□□ -0.64
EPHB3-201ENST00000330394 A0A087WX48 190 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 KNCNA6PVL3 124 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 LINC00311Q8N616 119 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 PRSS33Q8NF86 280 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 CFAP54Q96N23 3096 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 MBD6Q96DN6 1003 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 LHBP01229 141 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 PTH2Q96A98 100 aa11.04□□□□□ -0.64
EPHB3-201ENST00000330394 NTN5Q8WTR8 489 aaPredicted RBP11.03□□□□□ -0.64
EPHB3-201ENST00000330394 PRO1854Q9UHT4 67 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 NCOR2Q9Y618 2525 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 C19orf71A6NCJ1 209 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 SDHAF1A6NFY7 115 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 RHPN1-AS1Q9BWJ2 59 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 OVOL3O00110 214 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 SLC25A20O43772 301 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 Q6ZS92 163 aa11.03□□□□□ -0.64
EPHB3-201ENST00000330394 IGKV1D-37A0A075B6S9 117 aa11.02□□□□□ -0.64
EPHB3-201ENST00000330394 PHLDA1Q8WV24 401 aaPredicted RBP11.02□□□□□ -0.64
EPHB3-201ENST00000330394 PLEKHB2Q96CS7 222 aa11.02□□□□□ -0.64
EPHB3-201ENST00000330394 NCKAP5O14513 1909 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 F6UB75 175 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 K7EIM0 57 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 SAA4P35542 130 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
EPHB3-201ENST00000330394 TRIOO75962 3097 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 TRAV26-1A0A087WT03 109 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 COPS9Q8WXC6 57 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.65
EPHB3-201ENST00000330394 PMVKQ15126 192 aa11.01□□□□□ -0.65
EPHB3-201ENST00000330394 LTBP2Q14767 1821 aa11.01□□□□□ -0.65
EPHB3-201ENST00000330394 Q8N7P7 452 aa11.01□□□□□ -0.65
EPHB3-201ENST00000330394 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
EPHB3-201ENST00000330394 NUP210LQ5VU65 1888 aa11.01□□□□□ -0.65
EPHB3-201ENST00000330394 TAL2Q16559 108 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 C20orf78Q9BR46 151 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 MOB4Q9Y3A3 225 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 I3L2K1 104 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 WT1P19544 449 aaPredicted RBP11□□□□□ -0.65
EPHB3-201ENST00000330394 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
EPHB3-201ENST00000330394 TMEM190Q8WZ59 177 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 C1QTNF4Q9BXJ3 329 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 PRSS22Q9GZN4 317 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 PRAC2D3DTV9 90 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 PIMREGQ9BSJ6 248 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 DKK4Q9UBT3 224 aa11□□□□□ -0.65
EPHB3-201ENST00000330394 H3BUX3 64 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 GNRH2O43555 120 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 EIF4EBP1Q13541 118 aaPredicted RBP10.99□□□□□ -0.65
EPHB3-201ENST00000330394 Q8N976 141 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 J3QQQ9 107 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 ODF1Q14990 250 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 C1orf159Q96HA4 380 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 USP9YO00507 2555 aaPredicted RBP10.99□□□□□ -0.65
EPHB3-201ENST00000330394 TRAV12-2A0A075B6T6 113 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 TRAV13-1A0A0B4J241 112 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 YAE1D1Q9NRH1 226 aa10.99□□□□□ -0.65
EPHB3-201ENST00000330394 TRBV7-1A0A0A6YYK4 115 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 MLST8Q9BVC4 326 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 KLK9Q9UKQ9 250 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 H3BMM0 161 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 C11orf44Q8N8P7 122 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 SPAG8Q99932 426 aaPredicted RBP10.98□□□□□ -0.65
EPHB3-201ENST00000330394 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
EPHB3-201ENST00000330394 MINOS1Q5TGZ0 78 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 MINOS1-NBL1R4GNA1 71 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 SPINK13Q1W4C9 94 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 ZNF48Q96MX3 618 aaPredicted RBP10.98□□□□□ -0.65
EPHB3-201ENST00000330394 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
EPHB3-201ENST00000330394 A0A1W2PNU3 283 aaPredicted RBP10.97□□□□□ -0.65
EPHB3-201ENST00000330394 TMEM101Q96IK0 257 aa10.97□□□□□ -0.65
EPHB3-201ENST00000330394 CHD9Q3L8U1 2897 aa10.97□□□□□ -0.65
EPHB3-201ENST00000330394 IGHV3-53P01767 116 aa10.97□□□□□ -0.65
EPHB3-201ENST00000330394 DEFB1P60022 68 aa10.97□□□□□ -0.65
EPHB3-201ENST00000330394 IGKV2D-26A0A0A0MRZ7 120 aa10.97□□□□□ -0.65
EPHB3-201ENST00000330394 TRGV2A0A075B6R0 118 aa10.96□□□□□ -0.65
EPHB3-201ENST00000330394 RS1O15537 224 aa10.96□□□□□ -0.65
EPHB3-201ENST00000330394 M0R1W7 72 aa10.96□□□□□ -0.65
EPHB3-201ENST00000330394 IGLV2-23P01705 113 aa10.96□□□□□ -0.65
EPHB3-201ENST00000330394 LY6G5BQ8NDX9 201 aa10.96□□□□□ -0.65
EPHB3-201ENST00000330394 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.66
EPHB3-201ENST00000330394 LINC00158P58513 81 aa10.96□□□□□ -0.66
EPHB3-201ENST00000330394 RUSC1-AS1Q66K80 236 aa10.96□□□□□ -0.66
EPHB3-201ENST00000330394 C3orf56Q8N813 242 aa10.96□□□□□ -0.66
EPHB3-201ENST00000330394 C15orf53Q8NAA6 179 aa10.96□□□□□ -0.66
EPHB3-201ENST00000330394 C11orf68Q9H3H3 251 aaKnown RBP10.96□□□□□ -0.66
EPHB3-201ENST00000330394 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 CGB3P0DN86 165 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 CGB7P0DN87 165 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GATD1Q8NB37 220 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 BPESC1Q9GZL8 116 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 IFITM1P13164 125 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms