RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 IGLC6P0CF74 106 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 HIST2H2BCQ6DN03 193 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 HIST2H2BDQ6DRA6 164 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 DEFB123Q8N688 67 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 C20orf78Q9BR46 151 aa6.11□□□□□ -1.43
VMA21-201ENST00000330374 RAB9AP51151 201 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 NDPQ00604 133 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 SPANXN1Q5VSR9 72 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 C8orf31Q8N9H6 132 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 SMAD5-AS1Q9Y6J3 95 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 CEACAM4O75871 244 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 PSMG3-AS1Q96PY0 264 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 E9PLD3 99 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 TNFRSF13BO14836 293 aaPredicted RBP6.1□□□□□ -1.43
VMA21-201ENST00000330374 EMP1P54849 157 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 CKS1BP61024 79 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 ATRXP46100 2492 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 PDE6HQ13956 83 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 TNFRSF14Q92956 283 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 RAB1BQ9H0U4 201 aa6.1□□□□□ -1.43
VMA21-201ENST00000330374 A0A1B0GV72 72 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 CEACAM3P40198 252 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 ECSCRQ19T08 205 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 ATP5LO75964 103 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 APOMO95445 188 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 IGHG4P01861 327 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 STHQ8IWL8 128 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 FAM57AQ8TBR7 257 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 PTH2Q96A98 100 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 MRPL16Q9NX20 251 aaKnown RBP6.09□□□□□ -1.43
VMA21-201ENST00000330374 HIGD1BQ9P298 99 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 F8W1H4 67 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 H3BVH4 76 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 M0R381 172 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 LAGE3Q14657 143 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 SCGB1D4Q6XE38 83 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 ZNF575Q86XF7 245 aa6.09□□□□□ -1.43
VMA21-201ENST00000330374 OR11H12B2RN74 326 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 PSMB2P49721 201 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 Q8N8P6 123 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 OR11H1Q8NG94 326 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 OR11H2Q8NH07 326 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 LINC01560Q8TB33 94 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 TM2D2Q9BX73 214 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 BSNQ9UPA5 3926 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 IGKV3D-20A0A0C4DH25 116 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 ZNF502Q8TBZ5 544 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 GLMPQ8WWB7 406 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 SRSF9Q13242 221 aaKnown RBP eCLIP6.08□□□□□ -1.44
VMA21-201ENST00000330374 C5orf64Q2M2E5 130 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 DPM3Q9P2X0 92 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 KAAG1Q9UBP8 84 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 CTSGP08311 255 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 HLA-DRB4P13762 266 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 HERV-K104P63124 156 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 RRN3P1Q2M238 152 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 SYT8Q8NBV8 401 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 HLA-DRB4X5D2U9 266 aa6.08□□□□□ -1.44
VMA21-201ENST00000330374 IGKV3-7A0A075B6H7 116 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 A0A0U1RRA0 63 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 MGPP08493 103 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 DEFB1P60022 68 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 SCGB3A1Q96QR1 104 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 SPATA25Q9BR10 227 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 IGLV11-55A0A075B6I3 123 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 SHISA9B4DS77 424 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 AGPAT4-IT1Q9H0P7 198 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 CREBBPQ92793 2442 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 TRAV26-1A0A087WT03 109 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 LINC01549A6NIU2 74 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 Q6ZS92 163 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 KLHL30-AS1Q8NEE0 82 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 A0A087WX48 190 aa6.07□□□□□ -1.44
VMA21-201ENST00000330374 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.07□□□□□ -1.44
VMA21-201ENST00000330374 PRR30Q53SZ7 412 aaPredicted RBP6.07□□□□□ -1.44
VMA21-201ENST00000330374 IGF1P05019 195 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 TMEM78Q5T7P6 136 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 ZFP2Q6ZN57 461 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 RPL39LQ96EH5 51 aaKnown RBP6.06□□□□□ -1.44
VMA21-201ENST00000330374 ZNF48Q96MX3 618 aaPredicted RBP6.06□□□□□ -1.44
VMA21-201ENST00000330374 SORL1Q92673 2214 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 LINC01548A6NM66 108 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 ZNF815PA8K554 130 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 C15orf32Q32M92 178 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 CLEC19AQ6UXS0 136 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 SMPXQ9UHP9 88 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 CELSR1Q9NYQ6 3014 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 RPL13AP40429 203 aaKnown RBP6.06□□□□□ -1.44
VMA21-201ENST00000330374 SRSF1Q07955 248 aaKnown RBP eCLIP6.06□□□□□ -1.44
VMA21-201ENST00000330374 PRO3102Q9H379 93 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 COL12A1Q99715 3063 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 MYMXA0A1B0GTQ4 84 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 S100A4P26447 101 aaKnown RBP6.06□□□□□ -1.44
VMA21-201ENST00000330374 ID1P41134 155 aa6.06□□□□□ -1.44
VMA21-201ENST00000330374 ZFHX3Q15911 3703 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 IGLV2-18A0A075B6J9 118 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 SLC25A16P16260 332 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 C14orf178Q8N769 122 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms