RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TIMM8AO60220 97 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-201ENST00000328923 UBE2WQ96B02 151 aa9.21□□□□□ -0.94
SHMT2-201ENST00000328923 ACACAQ13085 2346 aa9.21□□□□□ -0.94
SHMT2-201ENST00000328923 CYSTM1Q9H1C7 97 aa9.21□□□□□ -0.94
SHMT2-201ENST00000328923 ELANEP08246 267 aa9.2□□□□□ -0.94
SHMT2-201ENST00000328923 PLNP26678 52 aa9.2□□□□□ -0.94
SHMT2-201ENST00000328923 C17orf58Q2M2W7 97 aa9.2□□□□□ -0.94
SHMT2-201ENST00000328923 LINC01546A6NGU7 62 aa9.2□□□□□ -0.94
SHMT2-201ENST00000328923 GATA1P15976 413 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-201ENST00000328923 ERHP84090 104 aaKnown RBP9.2□□□□□ -0.94
SHMT2-201ENST00000328923 EXOC3-AS1Q8N2X6 119 aa9.2□□□□□ -0.94
SHMT2-201ENST00000328923 NDUFA4L2Q9NRX3 87 aa9.2□□□□□ -0.94
SHMT2-201ENST00000328923 IGKV3-15P01624 115 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 ORM1P02763 201 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 IGHV1-2P23083 117 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 SIGLEC15Q6ZMC9 328 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 DPH3Q96FX2 82 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 TRBV6-1A0A0K0K1D8 114 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 H7C2G1 150 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 OVOL1O14753 267 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-201ENST00000328923 UTF1Q5T230 341 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 VKORC1Q9BQB6 163 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 DEFB127Q9H1M4 99 aa9.19□□□□□ -0.94
SHMT2-201ENST00000328923 APC2O95996 2303 aa9.18□□□□□ -0.94
SHMT2-201ENST00000328923 IGKV1D-37A0A075B6S9 117 aa9.18□□□□□ -0.94
SHMT2-201ENST00000328923 hADV29S1A0JD25 119 aa9.18□□□□□ -0.94
SHMT2-201ENST00000328923 IGHV4-39P01824 125 aa9.18□□□□□ -0.94
SHMT2-201ENST00000328923 LINC01620Q4KN68 170 aa9.18□□□□□ -0.94
SHMT2-201ENST00000328923 LINC00574Q9H8X3 128 aa9.18□□□□□ -0.94
SHMT2-201ENST00000328923 MRPL36Q9P0J6 103 aaKnown RBP9.18□□□□□ -0.94
SHMT2-201ENST00000328923 PRO1854Q9UHT4 67 aa9.18□□□□□ -0.94
SHMT2-201ENST00000328923 SAA1P0DJI8 122 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-201ENST00000328923 GP9P14770 177 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 DTX2Q86UW9 622 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 MYOZ3Q8TDC0 251 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 NXT2Q9NPJ8 142 aaKnown RBP9.17□□□□□ -0.94
SHMT2-201ENST00000328923 ATMQ13315 3056 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 SLC25A16P16260 332 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 WT1P19544 449 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-201ENST00000328923 CCL11P51671 97 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 SUB1P53999 127 aaKnown RBP eCLIP9.17□□□□□ -0.942e-7■■■□□ 15.5
SHMT2-201ENST00000328923 ZCCHC24Q8N2G6 241 aaKnown RBP9.17□□□□□ -0.94
SHMT2-201ENST00000328923 KLHL30-AS1Q8NEE0 82 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 FDCSPQ8NFU4 85 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
SHMT2-201ENST00000328923 TRGV5A0A0B4J1U4 118 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 IGKV1-16P04430 117 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 SEC61GP60059 68 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 LEAP2Q969E1 77 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 C1orf43Q9BWL3 253 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 SPRR3Q9UBC9 169 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 IGSF10Q6WRI0 2623 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 CRYGDP07320 174 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 COX7CP15954 63 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 Q8N8P6 123 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 MSRB1Q9NZV6 116 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 NAV3Q8IVL0 2385 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 PRR14LQ5THK1 2151 aa9.16□□□□□ -0.94
SHMT2-201ENST00000328923 TRAV41A0A0B4J266 112 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 F8VRH5 84 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-201ENST00000328923 Q6ZT83 130 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 ZNRF1Q8ND25 227 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 JPT2Q9H910 190 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 RPUSD1Q9UJJ7 312 aaKnown RBP9.15□□□□□ -0.94
SHMT2-201ENST00000328923 TINCRA0A1B0GVN0 87 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 H7C1H1 209 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 LYZL6O75951 148 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 CRYGBP07316 175 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 CRYGAP11844 174 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 ZNF71Q9NQZ8 489 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-201ENST00000328923 OTORQ9NRC9 128 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 ARFGEF3Q5TH69 2177 aa9.15□□□□□ -0.94
SHMT2-201ENST00000328923 TRBV10-2A0A0K0K1G8 114 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 RPL35AP18077 110 aaKnown RBP9.14□□□□□ -0.95
SHMT2-201ENST00000328923 Q6ZS46 218 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-201ENST00000328923 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 EIF4EBP3O60516 100 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-201ENST00000328923 COX6B1P14854 86 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 ATXN8Q156A1 80 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 RUSC1-AS1Q66K80 236 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 IGFL2Q6UWQ7 119 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 ZNF833PQ6ZTB9 187 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 TMEM167AQ8TBQ9 72 aa9.14□□□□□ -0.95
SHMT2-201ENST00000328923 ZNF256Q9Y2P7 627 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-201ENST00000328923 LHBP01229 141 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 IGHV3-30P01768 117 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 IGHV3-30-5P0DP03 117 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 HERVK_113P61574 105 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 C2orf82Q6UX34 121 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 BEX4Q9NWD9 120 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-201ENST00000328923 SSUH2Q9Y2M2 353 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms