RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MSRB2Q9Y3D2 182 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 TACC2O95359 2948 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 A0A0J9YY99 117 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 SPANXN1Q5VSR9 72 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 NPBQ8NG41 125 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 AJUBAQ96IF1 538 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 CUL9Q8IWT3 2517 aa9.78□□□□□ -0.84
CCDC60-201ENST00000327554 H3BVH4 76 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 RHODO00212 210 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 TGFAP01135 160 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 CFC1BP0CG36 223 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 CFC1P0CG37 223 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 SUMO2P61956 95 aaKnown RBP9.77□□□□□ -0.85
CCDC60-201ENST00000327554 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 ONECUT1Q9UBC0 465 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 CDX4O14627 284 aaPredicted RBP9.77□□□□□ -0.85
CCDC60-201ENST00000327554 NDPQ00604 133 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 C2orf66Q6UXQ4 117 aa9.77□□□□□ -0.85
CCDC60-201ENST00000327554 IGHV3-35A0A0C4DH35 117 aa9.76□□□□□ -0.85
CCDC60-201ENST00000327554 C10orf126Q8N4M7 172 aa9.76□□□□□ -0.85
CCDC60-201ENST00000327554 CSMD1Q96PZ7 3565 aa9.76□□□□□ -0.85
CCDC60-201ENST00000327554 IGHV3-30P01768 117 aa9.76□□□□□ -0.85
CCDC60-201ENST00000327554 IGHV3-30-5P0DP03 117 aa9.76□□□□□ -0.85
CCDC60-201ENST00000327554 CFAP161Q6P656 301 aa9.76□□□□□ -0.85
CCDC60-201ENST00000327554 Q6ZS46 218 aa9.76□□□□□ -0.85
CCDC60-201ENST00000327554 CRYGDP07320 174 aa9.75□□□□□ -0.85
CCDC60-201ENST00000327554 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
CCDC60-201ENST00000327554 NCOR1O75376 2440 aa9.75□□□□□ -0.85
CCDC60-201ENST00000327554 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
CCDC60-201ENST00000327554 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
CCDC60-201ENST00000327554 M0QXV9 152 aa9.74□□□□□ -0.85
CCDC60-201ENST00000327554 BUB3O43684 328 aa9.74□□□□□ -0.85
CCDC60-201ENST00000327554 SLC25A20O43772 301 aa9.74□□□□□ -0.85
CCDC60-201ENST00000327554 NDUFV3P56181 108 aaKnown RBP9.74□□□□□ -0.85
CCDC60-201ENST00000327554 RP1L1Q8IWN7 2480 aaPredicted RBP9.74□□□□□ -0.85
CCDC60-201ENST00000327554 TRAV8-2A0A0B4J237 113 aa9.74□□□□□ -0.85
CCDC60-201ENST00000327554 CRIP2P52943 208 aaPredicted RBP9.74□□□□□ -0.85
CCDC60-201ENST00000327554 DYNLRB1Q9NP97 96 aa9.74□□□□□ -0.85
CCDC60-201ENST00000327554 TRAV4A0A0B4J268 109 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 CENPVL3A0A0U1RRI6 287 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 PRTN3P24158 256 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 ASIPP42127 132 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 PIP4P1Q86T03 277 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 ZFAND3Q9H8U3 227 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 PRO1854Q9UHT4 67 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 CCDC179H3BU77 68 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 CRLF1O75462 422 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 SCGB1C2P0DMR2 95 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 PRR9Q5T870 116 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 SLC25A29Q8N8R3 303 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
CCDC60-201ENST00000327554 ARHGAP32A7KAX9 2087 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 IGHV3-66A0A0C4DH42 116 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 C9JAW5 83 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 LYNX1G3V0Z9 82 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 SPRY2O43597 315 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 TSHBP01222 138 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 LYNX1P0DP58 116 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 DEFB109BQ30KR1 87 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 DPM3Q9P2X0 92 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
CCDC60-201ENST00000327554 SCGB2A1O75556 95 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
CCDC60-201ENST00000327554 C9orf47Q6ZRZ4 202 aa9.72□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE12JA6NER3 117 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE7O76087 117 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE12FP0CL80 117 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE12GP0CL81 117 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE12IP0CL82 117 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 EMP1P54849 157 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 GAGE4Q13068 117 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 HES1Q14469 280 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 SHISA2Q6UWI4 295 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 TRPT1Q86TN4 253 aaKnown RBP9.71□□□□□ -0.85
CCDC60-201ENST00000327554 AMELXQ99217 191 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 FAM110AQ9BQ89 295 aa9.71□□□□□ -0.85
CCDC60-201ENST00000327554 CLPSL1A2RUU4 121 aa9.71□□□□□ -0.86
CCDC60-201ENST00000327554 SNCGO76070 127 aa9.71□□□□□ -0.86
CCDC60-201ENST00000327554 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
CCDC60-201ENST00000327554 E7EQL1 145 aa9.7□□□□□ -0.86
CCDC60-201ENST00000327554 M0R381 172 aa9.7□□□□□ -0.86
CCDC60-201ENST00000327554 HERVK_113P61574 105 aa9.7□□□□□ -0.86
CCDC60-201ENST00000327554 C14orf178Q8N769 122 aaPredicted RBP9.7□□□□□ -0.86
CCDC60-201ENST00000327554 MRPL53Q96EL3 112 aaKnown RBP9.7□□□□□ -0.86
CCDC60-201ENST00000327554 PLA2G2CQ5R387 149 aa9.7□□□□□ -0.86
CCDC60-201ENST00000327554 Q6Q795 121 aa9.7□□□□□ -0.86
CCDC60-201ENST00000327554 HIF1ANQ9NWT6 349 aa9.7□□□□□ -0.86
CCDC60-201ENST00000327554 TPRP12270 2363 aaKnown RBP9.69□□□□□ -0.86
CCDC60-201ENST00000327554 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
CCDC60-201ENST00000327554 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
CCDC60-201ENST00000327554 IGHV3-33P01772 117 aa9.69□□□□□ -0.86
CCDC60-201ENST00000327554 Q8N1Y9 231 aa9.69□□□□□ -0.86
CCDC60-201ENST00000327554 TIMD4Q96H15 378 aa9.69□□□□□ -0.86
CCDC60-201ENST00000327554 POLEQ07864 2286 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms